Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00646 ATGATTGATGATCCTTTTGGAGTTCTCCGTTCCTGGAACGATTCTCTCCATTTTTGCAGATGGGAAGGAGTCACTTGCGGCCGTCGGCATCGACGAGTCACAATTTTGGACCTCAGCCATAGAAGCTTGGTCGGTTCTTTGTCTCCATCGTTGGGTAACCTCACTTTTCTTAGATATATATATTTGCAGAACAACACATTCAACGGGAGAATCCCGGAGCAGATAGGTCGTCTATCCAGATTGCAGGTTTTGTTTCTGCATAACAACTCATTGAACGGAGAGATCCCTAGAAATCTCTCTCGCTGCTCCAACCTCTTACGTCTCCATCTTGGTAATAACAATCTCGTAGGAAACTTTCCAATTGAGATATTTGGCATTTCCGTCCTTCAACTTCTTGCATTCCACGGAAACAACATTTCAGGAGAGATCCTATCTGCTATAGGAAATCTTACTTCATTAGAAGCCTTGTCGGTTTCATATAATCTTTTAGGTGGAGGCATACCTTCCTCGATCGGCCTTCTCAGAAACTTGAAGTTCTTATCATTAGGCGGAAATCGACTTTCAGGCGTCTTTCCTTCATCTATGTACAATCTTTCATTGATCGAAACTTTCTCCGTCAAAAGTAATCAACTTCATGGAAGCCTACTGCCTGACATAGGCCACTCTTTCCCTGAGCTTAGATTCTTCCAAATCGGCTTCAATAACTTTACAGGCCATGTTCCTCCCTCCTTTTCCAATGCTTCAAACATTGAGTATTTTAAATTAATTGAGAACAACTTCTTTGGAAAAGTTAGTGTTGATTTTGGTGGAGCCAAAAACTTATCAGCACTGCTTTTAGAAAGTAATCATCTCAGAAGTGGTGATCCCGACGAACTGAATTTTCTAAGCTCATTGGCGAATTGCAGCAAGCTATCTCGACTGTGTTTGTTTGACAACTCATTTAGAGGAATTCTGCCTGGTTCGTTGGCCAACCTTTCCTCTCATCTCCACAAATTTGTGATCGCACAAAATCAATTGTTTGGTGAAATACCATCAAGAATTGGCAATCTTGTGGCCTTAAATCTTTTAGAACTGCAATTCAATTATCTTACAGGAGACTTGCCCTCTGAAATTGGCAGGCTTCTAAACTTGAGATATTTCAGTGCAGCTTCAAATGGTCTTTCAGGAGAAATTCCTTCTGCCATTGGAAACTTAACAAAATTGATCATACTTGATCTACAGGATAATAATTTTCATGGAGCCATTCCACCGAGCATTGAAAATTGCCAGGAGCTGTCCTTCTTGTCACTTCGCAAGAATAATCTTAGTGGCAGCTTTCCTGAACAAGTTTTTGACTTTCCAAACTTAGGACGGCTGCTGGATTTATCTAACAACAGGTTTAGTGGAGAATTGCCTGCTAAGATCAGTAGTCTAAAAAGATTGACTTCATTACGTTTATCTGGTAATCAACTTTCTGGAAATATTCCGAGTGGACTTGGCGATTGCGTAAGTTTGGAATATCTTGCCATGCAGGGAAATTACTTCCATGGATCTATTCCTCCAACCTTTAGTTCGTTGAGAGGCCTTCGACAACTTGATCTTTCTAACAACAATTTGTCCGGTCAAGTTCCAGATTTTCTGTCAACTTTTTCACTCACCTATTTGAACTTATCTTTCAATAATTTTGAGGGCGAGGTTCCAACTAATGGAGTTTTTTCAAATGCATCTTTGTTCTCATTGCTGGGGAATGACAGACTCTGCGGTGGAATCACCGCTCTGCGCCTGGCCAGTTGTACTCATGAAGCAAGTAAGAAGCCAAAATTGACCAAGCTTCTGAAAATTATTCTATCTCTATGCATTTGTCTCTTCGGGTTGGCTGCAATAGCATTCTTCTTACTTTGTTTGGTTCCTAAGAAAAAGAGAAAGAAAGCAGAAGCATCAAAATTGGAAGACTCATTATTCCTAGAGGTCTCATACAGTGACCTCCTTAAAGTAACAAATAACTTCTCTTCGAATAATTTGATTGGGAACGGATACTTCAGCTCTGTATATAAGGGTTACCTCGAAAAGATAGGAGAAACAGTCGCCATTAAAGTACTTAATCTTGAACGCCATGGAGCAATGAAAAGTTTTGCATCAGAATGCGAAGCGCTAAGAAATATTCGTCATAGAAATCTATTGAAAACACTAACTTCATGCTCCTCCGTTGATTTCCATGGAAATGATTTCAAAGCTCTTGTTTATGAATTCATGGCTAATGGAAGTCTAGATTCATGGCTGCATGTTAGCAATAGTTCAAGTCGAGAGGGAGGAGATCTGAAATTTCTTCAACGTGTAAATATTGCAATCGATGTGGCTACAGGACTCTATTATCTTCACAATCATTGTCATATCCCAATCGTACATTGTGATTTGAAGCCGAGCAACATTCTTCTAGACGAAGACATGACTGCCCATATTGGAGATTTTGGACTAACAAAACTTCTTCCAGAACTAACAAACTTTACTGAAAATAGCTCGGTCGGAATACGAGGAACTATTGGTTACACTGCTCCAGAATATGGTCAGGGCAGTGAGGTGTCCGCTCAGGGTGACATCTATAGCTACGAGATTCTACTGTTAGAGATGATAACAAGAAAAAGACCAACTGATGAGATGTTCATTGAAGGACTAAACCTCCATTCTTATGCTCGGAGGGCACTATCTAGCCAAGTACTTGACATTGTTGATCCATGCCTCTTACCTAGCAAAGAATCAGAGAAGACTAAAACGATAAACTCTTTGGTTTCTATGGTAAAGCTCGGAGTGGCGTGTTCGGTGAAATCTCCACGAGAACGGATTGACACCAAAAGCATTTGTCATGAGCTGCGAATAGTAAGAAATTCCTTGCTTGAGCGGAACAATACTTAA 2889 40.36 MIDDPFGVLRSWNDSLHFCRWEGVTCGRRHRRVTILDLSHRSLVGSLSPSLGNLTFLRYIYLQNNTFNGRIPEQIGRLSRLQVLFLHNNSLNGEIPRNLSRCSNLLRLHLGNNNLVGNFPIEIFGISVLQLLAFHGNNISGEILSAIGNLTSLEALSVSYNLLGGGIPSSIGLLRNLKFLSLGGNRLSGVFPSSMYNLSLIETFSVKSNQLHGSLLPDIGHSFPELRFFQIGFNNFTGHVPPSFSNASNIEYFKLIENNFFGKVSVDFGGAKNLSALLLESNHLRSGDPDELNFLSSLANCSKLSRLCLFDNSFRGILPGSLANLSSHLHKFVIAQNQLFGEIPSRIGNLVALNLLELQFNYLTGDLPSEIGRLLNLRYFSAASNGLSGEIPSAIGNLTKLIILDLQDNNFHGAIPPSIENCQELSFLSLRKNNLSGSFPEQVFDFPNLGRLLDLSNNRFSGELPAKISSLKRLTSLRLSGNQLSGNIPSGLGDCVSLEYLAMQGNYFHGSIPPTFSSLRGLRQLDLSNNNLSGQVPDFLSTFSLTYLNLSFNNFEGEVPTNGVFSNASLFSLLGNDRLCGGITALRLASCTHEASKKPKLTKLLKIILSLCICLFGLAAIAFFLLCLVPKKKRKKAEASKLEDSLFLEVSYSDLLKVTNNFSSNNLIGNGYFSSVYKGYLEKIGETVAIKVLNLERHGAMKSFASECEALRNIRHRNLLKTLTSCSSVDFHGNDFKALVYEFMANGSLDSWLHVSNSSSREGGDLKFLQRVNIAIDVATGLYYLHNHCHIPIVHCDLKPSNILLDEDMTAHIGDFGLTKLLPELTNFTENSSVGIRGTIGYTAPEYGQGSEVSAQGDIYSYEILLLEMITRKRPTDEMFIEGLNLHSYARRALSSQVLDIVDPCLLPSKESEKTKTINSLVSMVKLGVACSVKSPRERIDTKSICHELRIVRNSLLERNNT 962
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9908482 9911450 + Bda012493.1 Bda15g00646 22341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00646 962 Gene3D Phosphorylase Kinase; domain 1 643 743 - -
Bda15g00646 962 Gene3D Ribonuclease Inhibitor 296 600 IPR032675 -
Bda15g00646 962 Gene3D Transferase(Phosphotransferase) domain 1 744 961 - -
Bda15g00646 962 Gene3D Ribonuclease Inhibitor 1 104 IPR032675 -
Bda15g00646 962 SUPERFAMILY L domain-like 328 581 - -
Bda15g00646 962 Gene3D Ribonuclease Inhibitor 106 215 IPR032675 -
Bda15g00646 962 ProSitePatterns Protein kinases ATP-binding region signature. 668 691 IPR017441 GO:0005524
Bda15g00646 962 SMART serkin_6 662 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00646 962 SMART LRR_typ_2 78 102 IPR003591 -
Bda15g00646 962 SMART LRR_typ_2 398 422 IPR003591 -
Bda15g00646 962 SMART LRR_typ_2 350 374 IPR003591 -
Bda15g00646 962 SMART LRR_typ_2 174 197 IPR003591 -
Bda15g00646 962 SMART LRR_typ_2 471 495 IPR003591 -
Bda15g00646 962 SMART LRR_typ_2 519 543 IPR003591 -
Bda15g00646 962 SUPERFAMILY Protein kinase-like (PK-like) 644 949 IPR011009 -
Bda15g00646 962 ProSitePatterns Serine/Threonine protein kinases active-site signature. 793 805 IPR008271 GO:0004672|GO:0006468
Bda15g00646 962 SUPERFAMILY L domain-like 12 326 - -
Bda15g00646 962 ProSiteProfiles Protein kinase domain profile. 662 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00646 962 Pfam Leucine rich repeat N-terminal domain 2 26 IPR013210 -
Bda15g00646 962 Pfam Leucine rich repeat 497 555 IPR001611 GO:0005515
Bda15g00646 962 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 2 957 - -
Bda15g00646 962 Gene3D Ribonuclease Inhibitor 216 295 IPR032675 -
Bda15g00646 962 Pfam Protein kinase domain 664 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00646 962 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 957 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda15g00643 Bda-Chr15:9641376 Bda15g00646 Bda-Chr15:9908482 0 dispersed
Bda15g00644 Bda-Chr15:9798340 Bda15g00646 Bda-Chr15:9908482 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70110 PF00069 Pkinase 8.30E-40 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00646 - - pvy:116111738 996.112