Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00650 CTCTTTGTGTTTGATTTTGGTGGTGCAGGGTTTAGGATGGAGCCTATGGATATAGTGGGAAAGTCGAAAGAGGACGCTTCGCTTCCGAAAGCAACTATGACGAAAATCATTAAGGAGATGTTGCCGCCGGATGTACGAGTCGCAAGAGATGCTCAAGATCTTTTAATCGAGTGTTGTGTAGAGTTTATAAATCTAGTATCATCGGAGTCTAATGAAGTATGTAACAGGGAAGATAAAAGAACGATTGCGCCTGAACATGTACTGAAGGCATTAGAGATACTTGGTTTTAGCGAGTACATCGAAGAAGTCTATTCCGCATATGAACAGCACAAGCTCGAGACCATGCAAGACTCCTTGAAGGGTGGAAAGTGGAGCAATGGAGCTGAAATGACGGAGGAGGAGGCCCTGCTGGAACAGCAGAGAATGTTTGCCGAGGCTCGAGCAAGAATGAATGGCGGGGCCGCAGCTCCAAAGCAAGCAGAGGGTGATCAAAGTTTAGAGAGCTAA 507 46.15 LFVFDFGGAGFRMEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCNREDKRTIAPEHVLKALEILGFSEYIEEVYSAYEQHKLETMQDSLKGGKWSNGAEMTEEEALLEQQRMFAEARARMNGGAAAPKQAEGDQSLES 168
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9955655 9957936 + Bda012497.1 Bda15g00650 22345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00650 168 MobiDBLite consensus disorder prediction 148 168 - -
Bda15g00650 168 PANTHER PROTEIN DR1 HOMOLOG 13 167 IPR044255 -
Bda15g00650 168 Gene3D Histone, subunit A 16 156 IPR009072 GO:0046982
Bda15g00650 168 SUPERFAMILY Histone-fold 24 153 IPR009072 GO:0046982
Bda15g00650 168 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 26 91 IPR003958 -
Bda15g00650 168 PANTHER PROTEIN DR1 HOMOLOG 13 167 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda14g00905 Bda15g00650 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01751 Bda-Chr11:52275714 Bda15g00650 Bda-Chr15:9955655 2.58E-75 dispersed
Bda15g00650 Bda-Chr15:9955655 Bda15g00184 Bda-Chr15:4420974 1.37E-17 dispersed
Bda14g00905 Bda-Chr14:7036190 Bda15g00650 Bda-Chr15:9955655 1.11E-96 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17198 PF00808 CBFD_NFYB_HMF 4.60E-22 CL0012 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00650 K21751 - jre:109017784 288.885