Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00682 CTGATGGGGAGTTTCGAAAAAAGGAAAAAACTTTGTGTAAAACAAGGAGAACCCATCTTAGTTTCTCCATCAGAACCAACAGAAAAGGGTCTCTACTTCCTCTCAAACCTAGACCAGAACATTGCAGTCATAGTGAAGACCATTTACTGCTACAAATCAGACTCAAAAGGGAACCAAAATGCAGCAGAAGTGATCAGAAATTCGCTGTCTAGGGTTCTTGTTCCGTTCTATCCGTTTGCAGGGCGAGTTATGGTCAGCTCGGAGGGGAAGCTGATCAATACTTGGAAGTTGGTTTATGAGATTCCGGGCAACAGTATTCTCGAGATTGCCTCTCTCGTTGTTCAGCTGATCGTTGACTGCAACGGAGAAGGTGCAGTTTTGGTGGAGGCTGAAGCAGACTGTGGGATTGAAGAGTTGGGAGATGCATCCAAACCTGATCCTGAAATACTTGGGAAGTTGGTTTATGAGATTCCCGGGGCAAACAGTATTCTCGAGATGCCTCTTCTCGTTGTTCAGGTGACCAAATTCAATTGTGGTGGGTTTGTTCTTGGGCTATGCATGAACCACTGCATCAATGATGGGATTTCAGCGATGAATTTCATAAATTCATGGGCTAAAACTGCCAGAAACTTCCCGTTCAGCCTCACTCCATTTATAGACAGGACAATTCTCAAATCCAGAAACCCACCTAAGATTGAATTCCCCCACCATGAATTTGCAGAGATTGAAGACATTTCAAGCATTACCAATCTCAACAAAGAAGAAGAAACACTTTACCGATCATTCCTTTTTGACCGCGAAAAGCTCGAAAAGCTCAAGAAAACGGCGATGGAAGATGGAGTTCTAGAGAATTGCACCACTTTTCAAGCTCTCTCAGCCTTTGTATGGAAAACAAGAACTCAAGCTCTAAAAATGGCGGCTGATCAACAAATCAAGCTCCTCTTTGCTGTAGATGGACGGTCCAAATTCGACCCACCCATACCAGACGGGTACTTTGGAAATGCCATCGTCTTGACCAACTCCCTGAGTAAAGCAAGAGATGTAACAGAAAAGCCATTATCATTTACAGTGGAGCTCATTCAGAAGGCAGTGAAAATGATAACAGACAGTTACATGAGATCCGCTATTGATTATTTTGAAGTAACTAGGGCTAGGCCATCACTTGCAGCCACTCTTTTGATCACTACTTGGTCTAGGTTATCATTTTACGATGCAGATTTCGGGTGGGGAGAACCTCTTTTTTCTGGACCGGTGACTTTGCCTGAGAAAGAAGTTGTTCTGTTCCTCTCTAATGGCAGACACAGTGAGAGCATAAACGTGCTTCTGGGTTTGCCTGCTTCTGCCATGGAGGTATTTGCAGATCAATTTATGCAGATTCGCTGA 1383 43.82 LMGSFEKRKKLCVKQGEPILVSPSEPTEKGLYFLSNLDQNIAVIVKTIYCYKSDSKGNQNAAEVIRNSLSRVLVPFYPFAGRVMVSSEGKLINTWKLVYEIPGNSILEIASLVVQLIVDCNGEGAVLVEAEADCGIEELGDASKPDPEILGKLVYEIPGANSILEMPLLVVQVTKFNCGGFVLGLCMNHCINDGISAMNFINSWAKTARNFPFSLTPFIDRTILKSRNPPKIEFPHHEFAEIEDISSITNLNKEEETLYRSFLFDREKLEKLKKTAMEDGVLENCTTFQALSAFVWKTRTQALKMAADQQIKLLFAVDGRSKFDPPIPDGYFGNAIVLTNSLSKARDVTEKPLSFTVELIQKAVKMITDSYMRSAIDYFEVTRARPSLAATLLITTWSRLSFYDADFGWGEPLFSGPVTLPEKEVVLFLSNGRHSESINVLLGLPASAMEVFADQFMQIR 460
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 10246878 10252352 + Bda012533.2 Bda15g00682 22377

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00682 460 Pfam Transferase family 115 456 - -
Bda15g00682 460 Pfam Transferase family 20 91 - -
Bda15g00682 460 Gene3D - 8 241 IPR023213 -
Bda15g00682 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 114 456 - -
Bda15g00682 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 92 - -
Bda15g00682 460 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 114 456 - -
Bda15g00682 460 Gene3D - 243 458 IPR023213 -
Bda15g00682 460 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 12 92 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00682 K15400 HHT1; omega-hydroxypalmitate O-feruloyl transferase [EC:2.3.1.188] - qsu:112001733 617.846
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bda06g00718 Bda15g00682 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01509 Bda-Chr1:50933432 Bda15g00682 Bda-Chr15:10246878 1.55E-70 dispersed
Bda02g00054 Bda-Chr2:2298433 Bda15g00682 Bda-Chr15:10246878 1.16E-48 dispersed
Bda03g00089 Bda-Chr3:859009 Bda15g00682 Bda-Chr15:10246878 3.65E-49 dispersed
Bda04g00143 Bda-Chr4:3852746 Bda15g00682 Bda-Chr15:10246878 1.40E-56 dispersed
Bda05g00028 Bda-Chr5:2011601 Bda15g00682 Bda-Chr15:10246878 3.01E-80 dispersed
Bda12g00452 Bda-Chr12:5597300 Bda15g00682 Bda-Chr15:10246878 1.12E-40 dispersed
Bda12g00560 Bda-Chr12:9414922 Bda15g00682 Bda-Chr15:10246878 9.84E-79 dispersed
Bda15g00475 Bda-Chr15:7922577 Bda15g00682 Bda-Chr15:10246878 7.26E-31 dispersed
Bda15g00682 Bda-Chr15:10246878 Bda07g01381 Bda-Chr7:16641520 4.49E-146 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g70 . . Bda06g00718 Bda15g00682 Bpe12g00471 . . Bma12g01088 . . Cma10g00046 Cma11g00021 Car10g00035 Car11g00020 Sed12g2525 . Cpe04g01627 Bhi02g00660 Tan09g2398 Cmetu02g1444 . Hepe09g0033 . . Cla06g01759 Cam06g1951 Cec06g2000 Cco06g2006 Clacu06g1908 Cmu06g1848 Cre06g2662 . . Cone13ag0236 Cone19ag0222 . . . . . Blo15g00199 . . Bpe07g00898 . . Bma08g00267 . Cmo10g00041 Cmo11g00021 . . . . . Cpe18g00919 . . . . . . . . . . . . . . Lsi06g01657 Csa01g00038 Chy02g02681 Cme02g02085
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004260 2 1 1 1 2 0 2 1 1 1 0 1 2 1 1 2 1 4 2 1 1 1 1 2 2 1 1 3 3 1 43
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda15g00682 Bda_Chr15 FPKM 5.866942 4.751929 1.362669 1.077298 8.694608 10.059224 9.596179 0.0 0.0