Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00741 ATGGCTGATCCTCACTCTAATACCCCTCTCACTGATCCACTAGACAACCCACCTCCTCCCCCTCCACCTCCACCTCCGCCGCTGCCGCCGTCCCCTTCTCCTGCACCTGTTGTTTTGCAAGTAAGAGTTCCAGGGGACACTGATCTTATAGTTCCTCCGGTTCCTGTTCCTTCTCCTGCTTCAGTTTCTTCTCGACTGATCTCGCCGGCGACCGGCAGGCATCCGGCTTACAGGGGAATTAGAAGCCGAAGTGGGAAATGGGTTTCTGAAATCCGGGAGCCACGTAAAACCACCCGCATTTGGCTTGGAACTTACTTGACGCAGGAAATGGCGGCAGCAGCATATGATGTTGCCGCCATTGCTCTGAAAGGCCCGGGCACGCCCTTGAATTTTCCGAACTTGATTCTATCGTATCCGATTCCAGCTTCTGCTTCTCCTGCCGATATTCGCGCTGCAGCAGCTATTGCTGCAGCGGCTCAGCAGCAAAGGCTGCCGGAGAGCGGCGGTGAAAGCTCCCAACTTAGCCGGTCAGCGACAGAAGAGCTGCCGAGTGCGGTGGAGGGGAAAACATCAGAGTTTGTTGACGAGGAAGAGTTGCTGAATATGCCCAATGTGCTTGTAGACATGGCCAAAGGTATGCTGGTAAGCCCTCCTCGGCTGAAGTCGTCATCCTCCGACGACTCGCCGGACGATTCAGCCGGAGGTGGACTATGGAATTACAGTTAA 726 55.1 MADPHSNTPLTDPLDNPPPPPPPPPPPLPPSPSPAPVVLQVRVPGDTDLIVPPVPVPSPASVSSRLISPATGRHPAYRGIRSRSGKWVSEIREPRKTTRIWLGTYLTQEMAAAAYDVAAIALKGPGTPLNFPNLILSYPIPASASPADIRAAAAIAAAAQQQRLPESGGESSQLSRSATEELPSAVEGKTSEFVDEEELLNMPNVLVDMAKGMLVSPPRLKSSSSDDSPDDSAGGGLWNYS 241
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 10894917 10895642 + Bda012597.1 Bda15g00741 22436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00741 241 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 64 240 - -
Bda15g00741 241 MobiDBLite consensus disorder prediction 162 194 - -
Bda15g00741 241 MobiDBLite consensus disorder prediction 164 180 - -
Bda15g00741 241 MobiDBLite consensus disorder prediction 216 241 - -
Bda15g00741 241 MobiDBLite consensus disorder prediction 11 37 - -
Bda15g00741 241 MobiDBLite consensus disorder prediction 1 38 - -
Bda15g00741 241 SMART rav1_2 76 138 IPR001471 GO:0003700|GO:0006355
Bda15g00741 241 Gene3D AP2/ERF domain 76 133 IPR036955 GO:0003700|GO:0006355
Bda15g00741 241 ProSiteProfiles AP2/ERF domain profile. 76 132 IPR001471 GO:0003700|GO:0006355
Bda15g00741 241 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF026 64 240 - -
Bda15g00741 241 SUPERFAMILY DNA-binding domain 76 133 IPR016177 GO:0003677
Bda15g00741 241 CDD AP2 77 134 IPR001471 GO:0003700|GO:0006355
Bda15g00741 241 Pfam AP2 domain 75 124 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01878 Bda-Chr7:36188859 Bda15g00741 Bda-Chr15:10894917 3.87E-21 dispersed
Bda08g00532 Bda-Chr8:5326882 Bda15g00741 Bda-Chr15:10894917 2.00E-41 dispersed
Bda15g00741 Bda-Chr15:10894917 Bda07g01877 Bda-Chr7:36182782 2.02E-38 dispersed
Bda15g00741 Bda-Chr15:10894917 Bda15g00742 Bda-Chr15:10900169 1.79E-36 tandem
Bda15g00741 Bda-Chr15:10894917 Bda06g00662 Bda-Chr6:9261373 1.87E-31 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17206 PF00847 AP2 2.80E-09 CL0081 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00741 - - cit:102618475 191.045