Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda15g00741 | ATGGCTGATCCTCACTCTAATACCCCTCTCACTGATCCACTAGACAACCCACCTCCTCCCCCTCCACCTCCACCTCCGCCGCTGCCGCCGTCCCCTTCTCCTGCACCTGTTGTTTTGCAAGTAAGAGTTCCAGGGGACACTGATCTTATAGTTCCTCCGGTTCCTGTTCCTTCTCCTGCTTCAGTTTCTTCTCGACTGATCTCGCCGGCGACCGGCAGGCATCCGGCTTACAGGGGAATTAGAAGCCGAAGTGGGAAATGGGTTTCTGAAATCCGGGAGCCACGTAAAACCACCCGCATTTGGCTTGGAACTTACTTGACGCAGGAAATGGCGGCAGCAGCATATGATGTTGCCGCCATTGCTCTGAAAGGCCCGGGCACGCCCTTGAATTTTCCGAACTTGATTCTATCGTATCCGATTCCAGCTTCTGCTTCTCCTGCCGATATTCGCGCTGCAGCAGCTATTGCTGCAGCGGCTCAGCAGCAAAGGCTGCCGGAGAGCGGCGGTGAAAGCTCCCAACTTAGCCGGTCAGCGACAGAAGAGCTGCCGAGTGCGGTGGAGGGGAAAACATCAGAGTTTGTTGACGAGGAAGAGTTGCTGAATATGCCCAATGTGCTTGTAGACATGGCCAAAGGTATGCTGGTAAGCCCTCCTCGGCTGAAGTCGTCATCCTCCGACGACTCGCCGGACGATTCAGCCGGAGGTGGACTATGGAATTACAGTTAA | 726 | 55.1 | MADPHSNTPLTDPLDNPPPPPPPPPPPLPPSPSPAPVVLQVRVPGDTDLIVPPVPVPSPASVSSRLISPATGRHPAYRGIRSRSGKWVSEIREPRKTTRIWLGTYLTQEMAAAAYDVAAIALKGPGTPLNFPNLILSYPIPASASPADIRAAAAIAAAAQQQRLPESGGESSQLSRSATEELPSAVEGKTSEFVDEEELLNMPNVLVDMAKGMLVSPPRLKSSSSDDSPDDSAGGGLWNYS | 241 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 10894917 | 10895642 | + | Bda012597.1 | Bda15g00741 | 22436 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda15g00741 | 241 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 64 | 240 | - | - | |
Bda15g00741 | 241 | MobiDBLite | consensus disorder prediction | 162 | 194 | - | - | |
Bda15g00741 | 241 | MobiDBLite | consensus disorder prediction | 164 | 180 | - | - | |
Bda15g00741 | 241 | MobiDBLite | consensus disorder prediction | 216 | 241 | - | - | |
Bda15g00741 | 241 | MobiDBLite | consensus disorder prediction | 11 | 37 | - | - | |
Bda15g00741 | 241 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Bda15g00741 | 241 | SMART | rav1_2 | 76 | 138 | IPR001471 | GO:0003700|GO:0006355 | |
Bda15g00741 | 241 | Gene3D | AP2/ERF domain | 76 | 133 | IPR036955 | GO:0003700|GO:0006355 | |
Bda15g00741 | 241 | ProSiteProfiles | AP2/ERF domain profile. | 76 | 132 | IPR001471 | GO:0003700|GO:0006355 | |
Bda15g00741 | 241 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF026 | 64 | 240 | - | - | |
Bda15g00741 | 241 | SUPERFAMILY | DNA-binding domain | 76 | 133 | IPR016177 | GO:0003677 | |
Bda15g00741 | 241 | CDD | AP2 | 77 | 134 | IPR001471 | GO:0003700|GO:0006355 | |
Bda15g00741 | 241 | Pfam | AP2 domain | 75 | 124 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g01878 | Bda-Chr7:36188859 | Bda15g00741 | Bda-Chr15:10894917 | 3.87E-21 | dispersed | |
Bda08g00532 | Bda-Chr8:5326882 | Bda15g00741 | Bda-Chr15:10894917 | 2.00E-41 | dispersed | |
Bda15g00741 | Bda-Chr15:10894917 | Bda07g01877 | Bda-Chr7:36182782 | 2.02E-38 | dispersed | |
Bda15g00741 | Bda-Chr15:10894917 | Bda15g00742 | Bda-Chr15:10900169 | 1.79E-36 | tandem | |
Bda15g00741 | Bda-Chr15:10894917 | Bda06g00662 | Bda-Chr6:9261373 | 1.87E-31 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17206 | PF00847 | AP2 | 2.80E-09 | CL0081 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda15g00741 | - | - | cit:102618475 | 191.045 |