Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00742 TTAATGGAGGTTTTCTCAACTTTGTTTGATTCTAATTATGCTTCTTCGGAAAGAAGTGATATTAGCCGGAGGGGGAATTTTTCCGACGAGGAGCTTATTCTGGCGGCGAGCTCTCCGAAGAAGAGAGCCGGAAGGAAGAAGTTTAAGGAGACGAGGCACCCAGTTTTCCGGGGAGTGAGGAGGAGGAACTCCGGCAAGTGGGTTTGTGAAGTCAGAGAGCCGAATAAGCAGGCTAGGATTTGGCTCGGGACGTTTCCGACAGCGGAAATGGCGGCCAGAGCCCATGATGTGGCAGCAATTGCTCTCCGCGGCCGGGCTGCTTGCTTGAACTTTGCAGACTCTGCATGGCGGCTCCCTGTGCCGGCATCGGCGGAGGCAAAGGATATTCAGAAAGCAGCGGCTGAAGCTGCAGAGGCATTCCGACCACTCCCCGAAAATGAGGAGTTGAAGCCCGAAAAATTCACGGCAGAAACGCCGGAAAATGTGTTCTACATGGACGAGGAGGCTGTTTTCGGGATGCCAGGGCTGCTGGCAAACATGGCGGAGGGAATGCTATTGCCGCCGCCACAGGGAGAGGACAGCAGAGCTGATGACGGCGATTTCCATGCTGACGTGTCACTATGGAGTTACTCTATATAA 639 53.83 LMEVFSTLFDSNYASSERSDISRRGNFSDEELILAASSPKKRAGRKKFKETRHPVFRGVRRRNSGKWVCEVREPNKQARIWLGTFPTAEMAARAHDVAAIALRGRAACLNFADSAWRLPVPASAEAKDIQKAAAEAAEAFRPLPENEELKPEKFTAETPENVFYMDEEAVFGMPGLLANMAEGMLLPPPQGEDSRADDGDFHADVSLWSYSI 212
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 10900169 10900807 + Bda012598.1 Bda15g00742 22437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00742 212 PRINTS Ethylene responsive element binding protein signature 78 94 IPR001471 GO:0003700|GO:0006355
Bda15g00742 212 PRINTS Ethylene responsive element binding protein signature 56 67 IPR001471 GO:0003700|GO:0006355
Bda15g00742 212 PANTHER AP2/ERF DOMAIN-CONTAINING TRANSCRIPTION FACTOR 15 212 - -
Bda15g00742 212 ProSiteProfiles AP2/ERF domain profile. 55 112 IPR001471 GO:0003700|GO:0006355
Bda15g00742 212 Pfam AP2 domain 54 104 IPR001471 GO:0003700|GO:0006355
Bda15g00742 212 SMART rav1_2 55 118 IPR001471 GO:0003700|GO:0006355
Bda15g00742 212 SUPERFAMILY DNA-binding domain 55 114 IPR016177 GO:0003677
Bda15g00742 212 CDD AP2 56 114 IPR001471 GO:0003700|GO:0006355
Bda15g00742 212 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 15 212 IPR045277 GO:0003700
Bda15g00742 212 Gene3D AP2/ERF domain 55 113 IPR036955 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00662 Bda15g00742 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00916 Bda-Chr5:57728101 Bda15g00742 Bda-Chr15:10900169 2.69E-81 dispersed
Bda06g00088 Bda-Chr6:946874 Bda15g00742 Bda-Chr15:10900169 9.30E-10 dispersed
Bda06g00662 Bda-Chr6:9261373 Bda15g00742 Bda-Chr15:10900169 1.06E-113 dispersed
Bda07g00496 Bda-Chr7:6224391 Bda15g00742 Bda-Chr15:10900169 1.86E-57 dispersed
Bda07g01877 Bda-Chr7:36182782 Bda15g00742 Bda-Chr15:10900169 6.72E-84 dispersed
Bda08g00533 Bda-Chr8:5329583 Bda15g00742 Bda-Chr15:10900169 3.86E-72 dispersed
Bda15g00742 Bda-Chr15:10900169 Bda02g00418 Bda-Chr2:44826486 2.24E-34 dispersed
Bda15g00741 Bda-Chr15:10894917 Bda15g00742 Bda-Chr15:10900169 1.79E-36 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17207 PF00847 AP2 4.50E-15 CL0081 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00742 - K09286 csv:101220749 269.626