Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00743 ATGGCTTCTTCAGTTTTCTCTCTCCCTATCCCTCCAATCCCCACTCGCTTTCGTAAGAGCAAATGGACACTCGCTTTCTCCTCCCTCCCTCCTCTCCACCAACCAAAACCGGTTCCGCCATGTTCAGTCATTTCTCTACGCAAGAAGCCATTAAAGACGACGGTAGCAACCTCTGCTTACGTAACTGGGCCAGCATCGGACCCGATTGTGGGGGAGCTCGATTTGAAGGTAAATGGGTCGGATTCTCAGACGCAGTTGCTGGGTGTGATTCATTGGGGCCTATTATGGCGGCTTTTGATGAAGCATAAGCTGAGAATGGGGATTTGCGTGCTTTCTCTCATTGGATGCACCTCTTGCACCCTTTCGATGCCTATCTTTTCGGGAAGATTTTTCGAAGTACTTATAGGAGCAAGACCAGAGCCACTGTGGAGATTACTTAGTAAGGTTGGAGTTTTGTATGCATTGGAGCCAGTATTGACAATTATCTTTGTCATAAACATGAACACGATATGGGAGAAAGTTATGTCCAGATTAAGGGCGCAGATTTTTGGAAGGTTGCTCATTCAAAAGGTTGGTGAAATCACAGGTTTGTTAACATCTGACTTGGGTTCGCTTAAAGATGTGGTGAGTGAGAATATTTCAAGAGATCGTGGATTCAGAGCACTTTCAGAGGCAAGCAACTTTACACCAAGCCCAAGTACTTGGCACAATATGCATATTATTTACTTTGTCCCCCCAACTCGCGCCAATTTTAGGCGTGTTGATGCTCACCAAATTTTAAGGACAGTTTTTATGTCACATATTTCCCCTCTGATTCTTGCAGCCATATATAAGCGTTCAACTATTCCTGTTTTTAAAGCTCATGGGTTGGCCCAAGCATCCATGGCTGACTGTGTGACAGAGACATTTTCTGCTATTCGAACTGTACGATCTTTTAGCGGTGAGAAACGTCAAATGTTAATGTTTGGGCGGCAGATTCTTGCATATCAGAGCAGTGGGATGAAGCTTGGAACTTTTAAATCTATTAACGAATCCTTAACGAGAATTGCCGTTTATATTTCTCTTCTGGCCTTGTATAGTCTCGGAGGAAGCAAAGTGAAAGCGGGCGAACTTGCTGTTGGAACTGTGGCCTCTTTCATTGGATATACGTTCACTTTGACGTTTGCCGTTCAAGGATTGGTAAACACGTTGGGAGATCTCCGAGGAATGCTGGCTGCAGTAGAGAGAATTAATTCGATTTTGTCTGGAGTCGAAATCGATAACTCACTTGCCTATGGTTTAGAGAGAGAAATGAAGCAAAAGAATTCGGACGAGGAAAACAAATCCCAAGAAACGCATTACATGTCTGCTCTAAAATCCGATAGCAGTGTTAGCAATCTCGCTTGGTCTGGCGATATACGTCTTGAAGGTATATTCTGCTATTTTTCATGCAATTTTTGCAAAGATTATAAACTAAAAAATCATTCATTCAAGTTCATTTCCCCTTCAGATGTGCACTTCTCTTATCCGGTGAGACCGGACGTGGAAATTCTTAACGGGTTGAATTTAACAATTAAATGTGGAACTATAACTGCTTTGGTCGGCCCAAGCGGGGCCGGAAAGAGTACAATAGTACAACTTTTATCGAGATTCTACGAGCCAACTAGAGGTCATATAACAGTTAACGGCGAGGACGTTCGAACATTTGACAAGACCGAATGGGCTCGGGCTGTTTCAATCGTAAATCAAGAACCTGTTCTTTTTTCGGTATCGGTCGGAGAAAATATTGCGTATGGGCTTCCAGACGATTATGTGTCCAAAGATGAAGTGATAAAGGCGGCAAAGGCTGCAAATGCTCACGAGTTCATCATTTCGCTTCCACAGGGTTATGACACCCTCGTCGGAGAACGCGGCGGTCTACTTAGCGGCGGTCAGAGGCAGAGAATTGCCATTGCTAGAGCTTTGCTTAAGAACGCGCCAATTTTGATACTCGATGAGGCTACCAGTGCATTGGATGCAGTGAGCGAGCGGCTGGTCCAAGAAGCGCTAAATCATCTCATGAAAGGAAGGACGACGTTAGTGATCGCACATCGGCTGAGCACAGTTCAGAATGCTCATCAGATCGCAGTGGTTTCAAATGGCACGATCGTAGAGCTCGGGTCCCACTCGGAACTCTTGGCGAAGCAAGGCCAATATGCGGCCTTAGTCGGCACGCAAAGGCTGGCTTTCGAGTAA 2214 45.08 MASSVFSLPIPPIPTRFRKSKWTLAFSSLPPLHQPKPVPPCSVISLRKKPLKTTVATSAYVTGPASDPIVGELDLKVNGSDSQTQLLGVIHWGLLWRLLMKHKLRMGICVLSLIGCTSCTLSMPIFSGRFFEVLIGARPEPLWRLLSKVGVLYALEPVLTIIFVINMNTIWEKVMSRLRAQIFGRLLIQKVGEITGLLTSDLGSLKDVVSENISRDRGFRALSEASNFTPSPSTWHNMHIIYFVPPTRANFRRVDAHQILRTVFMSHISPLILAAIYKRSTIPVFKAHGLAQASMADCVTETFSAIRTVRSFSGEKRQMLMFGRQILAYQSSGMKLGTFKSINESLTRIAVYISLLALYSLGGSKVKAGELAVGTVASFIGYTFTLTFAVQGLVNTLGDLRGMLAAVERINSILSGVEIDNSLAYGLEREMKQKNSDEENKSQETHYMSALKSDSSVSNLAWSGDIRLEGIFCYFSCNFCKDYKLKNHSFKFISPSDVHFSYPVRPDVEILNGLNLTIKCGTITALVGPSGAGKSTIVQLLSRFYEPTRGHITVNGEDVRTFDKTEWARAVSIVNQEPVLFSVSVGENIAYGLPDDYVSKDEVIKAAKAANAHEFIISLPQGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDAVSERLVQEALNHLMKGRTTLVIAHRLSTVQNAHQIAVVSNGTIVELGSHSELLAKQGQYAALVGTQRLAFE 737
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 10901153 10906884 - Bda012599.1 Bda15g00743 22438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00743 737 SUPERFAMILY ABC transporter transmembrane region 95 213 IPR036640 GO:0005524|GO:0016021
Bda15g00743 737 Gene3D - 493 734 IPR027417 -
Bda15g00743 737 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 108 402 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bda15g00743 737 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 493 731 IPR003439 GO:0005524
Bda15g00743 737 SMART AAA_5 520 714 IPR003593 -
Bda15g00743 737 Pfam ABC transporter 511 662 IPR003439 GO:0005524
Bda15g00743 737 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 492 732 IPR027417 -
Bda15g00743 737 CDD ABC_MTABC3_MDL1_MDL2 496 732 - -
Bda15g00743 737 Pfam ABC transporter transmembrane region 272 389 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bda15g00743 737 Pfam ABC transporter transmembrane region 107 214 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bda15g00743 737 Gene3D ABC transporter type 1, transmembrane domain 86 215 IPR036640 GO:0005524|GO:0016021
Bda15g00743 737 SUPERFAMILY ABC transporter transmembrane region 271 415 IPR036640 GO:0005524|GO:0016021
Bda15g00743 737 Gene3D ABC transporter type 1, transmembrane domain 258 477 IPR036640 GO:0005524|GO:0016021
Bda15g00743 737 ProSitePatterns ABC transporters family signature. 634 648 IPR017871 GO:0005524
Bda15g00743 737 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 52 472 IPR039421 -
Bda15g00743 737 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 493 735 IPR039421 -
Bda15g00743 737 PANTHER ABC TRANSPORTER B FAMILY MEMBER 28 52 472 - -
Bda15g00743 737 PANTHER ABC TRANSPORTER B FAMILY MEMBER 28 493 735 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda15g00743 Bda-Chr15:10901153 Bda01g00476 Bda-Chr1:31830555 6.03E-69 dispersed
Bda15g00743 Bda-Chr15:10901153 Bda07g01146 Bda-Chr7:13594330 1.34E-60 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00743 K05657 - fve:101303858 964.14