Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda15g00752 | ATGGAGGAAAAGGAGCATTTCAGTACTGGTTTTGCACTTAAGGGTGATGACGCTCCAGATAGTTTCCGGGCTCCGAGATCCGACAACCCGAACCCGGTTGGTGTCCCTGCTCCTGTTGCTTCTACTGAGCCAACTGTAGCTGCTGGGTCGTCGTCGGGTACGGCGATGCCGGCGAGCGAAGGGAAAAAGAAGAGGGGACGACCGAGAAAGTACGGTCCGGACGGGAAGGCCATACTGCCGTTATCACCGATGCCGATTTCTGCATCGATTCCGCTTTCAGGAGAATATTCTGCTTGGAAGCGAGGTAGAGGAAAGCCATCGGAGTCGACCAAGAAGTCGAGCAAGTTTGTTTTCGGAACTCCTGGAGAGAAAATTGCGTACTCTGTTGGCGCGAATTTTACACCTCATGTGATCAATGTTAAGCCTGGCGAGGATGTTACAATGAAGATTATGTGCTTCTCTCAAGAAGGATCTCGAGCTATTTGTATACTCTCTGCAAATGGTACAATTTCAAGTGTCACTCTCCGGCAGCCTACTACATCTGGGGGTACTTTAACTTATGAGGGTCTTTTTGAGATACTTTCACTATCAGGATCATTTATTCTTACTGAGAATGGAGGACCAAAAAGCAGATCCGGAGGAATGAGTGTCTCATTGGCAGGCCCAGATGGTCGAGTGGTAGGCGGAGGGCTTGCCGGTCTATTGGTAGCTGCTAGTCCTGTTCAGATCGTGGTAGGAAGTTTCCTATCAGGTCACCAGCAAGAAAGCAAGGTGAAACAGCAACAAATCGACTTTACGTCAAAAGTTCTCTCTCCCCAAATAAATTCCATCAATGGTGATGAACTCAAAGGGATCTATAGTGGAGTAAAGCCTATTGTCACTCCAGCTTCTTCCTTCCCTGAAGACAACTCAGTCTCTCTAAACCCGGATTCAGCATTTAAAATCTTATCGATCGACAATAAATCAACTTTGTCCGAAGGTGAGCCGAAGGGCCCCATGCAATTGAACGGCAAAGTTTCTTGTTGA | 1026 | 47.76 | MEEKEHFSTGFALKGDDAPDSFRAPRSDNPNPVGVPAPVASTEPTVAAGSSSGTAMPASEGKKKRGRPRKYGPDGKAILPLSPMPISASIPLSGEYSAWKRGRGKPSESTKKSSKFVFGTPGEKIAYSVGANFTPHVINVKPGEDVTMKIMCFSQEGSRAICILSANGTISSVTLRQPTTSGGTLTYEGLFEILSLSGSFILTENGGPKSRSGGMSVSLAGPDGRVVGGGLAGLLVAASPVQIVVGSFLSGHQQESKVKQQQIDFTSKVLSPQINSINGDELKGIYSGVKPIVTPASSFPEDNSVSLNPDSAFKILSIDNKSTLSEGEPKGPMQLNGKVSC | 341 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 15 | 11110255 | 11114303 | + | Bda012610.1 | Bda15g00752 | 22447 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda15g00752 | 341 | Gene3D | - | 135 | 267 | - | - | |
| Bda15g00752 | 341 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 | 7 | 327 | - | - | |
| Bda15g00752 | 341 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 132 | 254 | - | - | |
| Bda15g00752 | 341 | MobiDBLite | consensus disorder prediction | 1 | 78 | - | - | |
| Bda15g00752 | 341 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 135 | 248 | IPR005175 | - | |
| Bda15g00752 | 341 | ProSiteProfiles | PPC domain profile profile. | 130 | 271 | IPR005175 | - | |
| Bda15g00752 | 341 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 7 | 327 | IPR039605 | GO:0003680 | |
| Bda15g00752 | 341 | CDD | DUF296 | 134 | 248 | IPR005175 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda07g00515 | Bda-Chr7:6608187 | Bda15g00752 | Bda-Chr15:11110255 | 1.42E-93 | dispersed | |
| Bda08g00520 | Bda-Chr8:5238190 | Bda15g00752 | Bda-Chr15:11110255 | 3.86E-52 | dispersed | |
| Bda11g00244 | Bda-Chr11:2898066 | Bda15g00752 | Bda-Chr15:11110255 | 4.02E-67 | dispersed | |
| Bda12g00353 | Bda-Chr12:4068711 | Bda15g00752 | Bda-Chr15:11110255 | 2.24E-47 | dispersed | |
| Bda13g00351 | Bda-Chr13:4380526 | Bda15g00752 | Bda-Chr15:11110255 | 3.04E-38 | dispersed | |
| Bda15g00752 | Bda-Chr15:11110255 | Bda15g00342 | Bda-Chr15:6271137 | 6.11E-22 | dispersed | |
| Bda15g00752 | Bda-Chr15:11110255 | Bda01g00382 | Bda-Chr1:29697558 | 2.33E-69 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda15g00752 | - | - | qsu:112026407 | 387.497 |