Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda15g00775 | ATGAACGACCATTTGTCTGTTTTGAGGTCTCTGATGCCATGCTTTTACGTCAAAAGAGGAGATCAAGCGTCAATAATTGGAGGGGTGATAGATTATATCAACGAGTTGCAGCAAGTTCTTCAGGCATTAGAGGCAAAGAAGCAAAGAAAAGTTTACAGTGAAATTTTAAGCCCTAGACTGGTTTCACCTGCACCACTCAGCCCTAGAAAACCAGCATTAAGCCCCAGAATCACCTTGCCAATCAGCCCAAGAACTCCTCAGTCAACTTGCCCTTACAAACCTAAGCTGCAAAAACCTTTCCTTTCTCCAACAATGGCGGCGGTTAATTCCGTTGAGCCTTCGCCTGCTTCTTCATCTACGTCTACTTCTGGTGCAGAGGGTTTTAATGAGCTGGTTGCTAATTGCAAATCTAGTGCGGCTGAAGTTGAGGTTAAGTTTTCTGCTCCTAATGTTCTTTTGAAGACTGTTTCTCCTAAGATTCCTGGACAAGCCATGAAAATTATTTCTGCTCTGGAAAATCTCTCCCTTGAGATTCTTCAAGTTAATGTCAATACTAATGATGAAACCATGGTTAATTCCTTCACCATCAAGATCGGAATTGAATGCCAACTAAGTGCGGAGGATCTAGCCCACAGAATTCAGCAAACCTTCTGCTAA | 657 | 42.62 | MNDHLSVLRSLMPCFYVKRGDQASIIGGVIDYINELQQVLQALEAKKQRKVYSEILSPRLVSPAPLSPRKPALSPRITLPISPRTPQSTCPYKPKLQKPFLSPTMAAVNSVEPSPASSSTSTSGAEGFNELVANCKSSAAEVEVKFSAPNVLLKTVSPKIPGQAMKIISALENLSLEILQVNVNTNDETMVNSFTIKIGIECQLSAEDLAHRIQQTFC | 218 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 15 | 11598979 | 11601575 | + | Bda012633.1 | Bda15g00775 | 22470 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda15g00775 | 218 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 1 | 36 | IPR011598 | GO:0046983 | |
| Bda15g00775 | 218 | Coils | Coil | 29 | 49 | - | - | |
| Bda15g00775 | 218 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 1 | 55 | IPR036638 | GO:0046983 | |
| Bda15g00775 | 218 | PANTHER | TRANSCRIPTION FACTOR SPEECHLESS | 1 | 218 | - | - | |
| Bda15g00775 | 218 | Gene3D | - | 1 | 55 | IPR036638 | GO:0046983 | |
| Bda15g00775 | 218 | PANTHER | TRANSCRIPTION FACTOR FAMA | 1 | 218 | IPR044283 | GO:0003700|GO:0010052 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bda05g00110 | Bda15g00775 | CCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda13g00549 | Bda-Chr13:6468389 | Bda15g00775 | Bda-Chr15:11598979 | 5.06E-20 | dispersed | |
| Bda15g00775 | Bda-Chr15:11598979 | Bda06g01272 | Bda-Chr6:43303342 | 1.43E-11 | dispersed | |
| Bda15g00775 | Bda-Chr15:11598979 | Bda05g00110 | Bda-Chr5:5386189 | 3.74E-64 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda15g00775 | K20558 | - | tcc:18605715 | 322.398 |