Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00779 ATGGGTTATCCACCGGAGAAAACTGTGAGGTTTCAGAATTGGAATTCTGAGAAAACTGCTGGCGAGTTATTTTTCACTGATGGCGGAACAAATTCAGAAAAGATCATTATTAGGGATAGATCAGTTTCAGAAAAGCTTCAAACAGGGTTTGAATCGGGGGCAAACAGATTTATAAGAATAAAGAAATCATTGAGATCATCTTCATTTAATAAATTCGTGGCCAAAGGCTTAGGTTCTGGAAATGAATTTCTTGATCCACAGGGACCTTTCCTGCAGAAGTGGAACAAGATATTTGTACTGTTTTGTATAATTGCAGTTTCACTGGATCCGTTGTTCTTTTATGTTCCTGTGATTAATGACTCGGAGAAGTGTCTTTGGTTGGATGGTAGGATGGAAATTATAGCCATTATCCTCAGATCATTTACTGACATATTCTATGTAGTACATATTATTTTTCAATTTCGTACTGGGTTTATTGCTCCCTCTTCCCGAGTATTTGGTAGAGGTGTTTTGGTTGAAGATTCTTGGGAAATAGCTAAGAGGTACCTGTCATCATACTTTCTAATCGATATTCTTGCAGTCCTCCCTCTACCTCAGGTGGTTATTTTAATAGTCATTCCAAAATTAGGAGGCTCAAGATCGTTGAATACGAAGAATTTATTGAAATTTATTGTCCTCTTTCAATATATTCCGAGGATTCTTAGAATTTATCCGCTATACAAAGAAGTTACAAGGACCTCTGGCATTCTAACTGAGACTGCATGGGCTGGAGCTGCATTCAATCTGTTTCTTTACATGCTAGCAAGCCATGTGCTTGGAGCATTCTGGTATCTGGTTTCCATTGAACGAGAAACCACCTGCTGGCAACAAGCTTGCCGGAATCAGGCTGGCTGTGTTCTCGATTCATTGTATTGTGATGGGAAGAGTCCCCGAGAAACTTTATTTCTGAACACATCTTGCCCAATTCAAGACCCAGACACGAAAAAATTTGATTTTGGAATATTCCTTGATGCTCTTCAATCTGGCGTTGTTGAGTCCATGGATTTTCCACAGAAGTTCTGTTACTGTTTCTGGTGGGGACTGAGAAATTTGAGTTCTCTTGGGCAAAATCTTGGGACAAGTACATATGTTTGGGAAATTGGCTTCGCAGTTTTCATTTCCATTGCAGGCTTGGTGTTATTTGCCTTTCTCATCGGCAATATGCAGACGTATCTGCAATCAACGACCACAAGATTAGAGGAGATGAGGGTAAAAAGAAGAGATGCAGAGCAGTGGATGTCACACCGCTTGCTTCCTGAGAGCCTGAGGGAGCGGATTAGAAGGTATGAACAATACAAATGGCAGGAAACTAGAGGTGTTGATGAAGAGAACCTGGTTCGAAATCTCCCCAAAGATCTTCGAAGAGACATAAAGCGGCATCTCTGCTTGGATCTTCTTATGAGAGTTCCAATGTTTGAAAAGATGGATGAACAATTGTTGGATGCAATGTGCGACCGTCTCAAACCTGTGCTCTATACAGAGGAGAGTTACATTGTTCGGGAAGGTGACCCAGTGGACGAGATGCTTTTCATCATGCGGGGGAAGCTATTAACTATGACTACAAATGGCGGACGAACTGGCTTCTTCAATTCCGAGCACCTCAAAGCAGGGGACTTTTGTGGAGAAGAATTACTAACATGGGCCCTTGATCCTCACTCCTCCGTTAATCTCCCCATCTCGACTAGAACAGTTCAAGCTCTTGTAGAAGTCGAGGCCTTCGCCTTGAAAGCCGATGATTTGAAGTTTGTGGCCTCTCAGTTCCGGCGGCTTCACAGCAAACAGATCCGCCACACTTTTAGGTTGTACTCGCAGCAATGGAGGACATGGGCAGCATGTTTCATCCAAGCAGCCTGGCGTCGCTACAGCAAAAAGAAGCTGGAAGAGTCGCTCCGCGAAGAGGAGAATCGATTGCAAGATGCATTGGCGAAAACCGGTGGTAGCTCACCGAGCTTGGGTGCTACCATTTATGCATCTCGATTTGCGGCAAATGCTCTCCGATTAATTGGACGGAGCAGTGCCCGTAAAGCAAGAGTGGCTGAAAGAGTTCCGCCAATGCTCCTTCAGAAGCCTGCGGAGCCAGACTTCACAGCCGAGTAA 2136 43.59 MGYPPEKTVRFQNWNSEKTAGELFFTDGGTNSEKIIIRDRSVSEKLQTGFESGANRFIRIKKSLRSSSFNKFVAKGLGSGNEFLDPQGPFLQKWNKIFVLFCIIAVSLDPLFFYVPVINDSEKCLWLDGRMEIIAIILRSFTDIFYVVHIIFQFRTGFIAPSSRVFGRGVLVEDSWEIAKRYLSSYFLIDILAVLPLPQVVILIVIPKLGGSRSLNTKNLLKFIVLFQYIPRILRIYPLYKEVTRTSGILTETAWAGAAFNLFLYMLASHVLGAFWYLVSIERETTCWQQACRNQAGCVLDSLYCDGKSPRETLFLNTSCPIQDPDTKKFDFGIFLDALQSGVVESMDFPQKFCYCFWWGLRNLSSLGQNLGTSTYVWEIGFAVFISIAGLVLFAFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLDLLMRVPMFEKMDEQLLDAMCDRLKPVLYTEESYIVREGDPVDEMLFIMRGKLLTMTTNGGRTGFFNSEHLKAGDFCGEELLTWALDPHSSVNLPISTRTVQALVEVEAFALKADDLKFVASQFRRLHSKQIRHTFRLYSQQWRTWAACFIQAAWRRYSKKKLEESLREEENRLQDALAKTGGSSPSLGATIYASRFAANALRLIGRSSARKARVAERVPPMLLQKPAEPDFTAE 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 11637413 11642280 + Bda012636.1 Bda15g00779 22474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00779 711 Coils Coil 636 656 - -
Bda15g00779 711 SUPERFAMILY cAMP-binding domain-like 413 606 IPR018490 -
Bda15g00779 711 Gene3D - 95 408 - -
Bda15g00779 711 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 6 710 - -
Bda15g00779 711 CDD CAP_ED 484 615 IPR000595 -
Bda15g00779 711 Pfam Cyclic nucleotide-binding domain 504 595 IPR000595 -
Bda15g00779 711 Pfam Ion transport protein 94 411 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bda15g00779 711 SUPERFAMILY Voltage-gated potassium channels 85 406 - -
Bda15g00779 711 Gene3D Helix hairpin bin 410 475 - -
Bda15g00779 711 Gene3D Jelly Rolls 482 602 IPR014710 -
Bda15g00779 711 ProSiteProfiles cAMP/cGMP binding motif profile. 484 567 IPR000595 -
Bda15g00779 711 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 6 710 - -
Bda15g00779 711 SMART cnmp_10 484 615 IPR000595 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda05g00116 Bda15g00779 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g01859 Bda-Chr7:35995650 Bda15g00779 Bda-Chr15:11637413 4.72E-143 dispersed
Bda07g01860 Bda-Chr7:36007565 Bda15g00779 Bda-Chr15:11637413 1.94E-30 dispersed
Bda02g00754 Bda-Chr2:48285764 Bda15g00779 Bda-Chr15:11637413 1.44E-32 transposed
Bda05g00152 Bda-Chr5:6374711 Bda15g00779 Bda-Chr15:11637413 2.23E-174 transposed
Bda05g00753 Bda-Chr5:56003081 Bda15g00779 Bda-Chr15:11637413 6.25E-121 transposed
Bda06g00851 Bda-Chr6:11759153 Bda15g00779 Bda-Chr15:11637413 2.94E-135 transposed
Bda07g01333 Bda-Chr7:16097327 Bda15g00779 Bda-Chr15:11637413 4.17E-78 transposed
Bda08g00108 Bda-Chr8:937727 Bda15g00779 Bda-Chr15:11637413 0 transposed
Bda12g00522 Bda-Chr12:7998729 Bda15g00779 Bda-Chr15:11637413 0 transposed
Bda15g00779 Bda-Chr15:11637413 Bda05g00113 Bda-Chr5:5661048 2.96E-55 wgd
Bda15g00779 Bda-Chr15:11637413 Bda06g00780 Bda-Chr6:10863321 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00779 K05391 - rcu:8274372 1165.21