Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00806 ATGGGTGACCCTGGATCTTACGGCTTAAGCCCTCGCTTGGATATTCAACAATTGTTGTTGGAAGCAAAACATCGATGGTTACGACCTGCTGAAATTTGTGAAATTCTCCGTAATTATCAGATGTTTCGTATTGAATCAGAGCCTCCACACCGACCACCAAGTGGTTCACTATTTCTTTTCGATCGAAAGGTTTTGAGATACTTTAGAAAGGATGGGCATAATTGGAGGAAGAAGAAAGATGGCAAGACTGTGAAGGAAGCTCACGAGAAGCTGAAGGTTGGAAGCATTGATGTATTACACTGTTATTATGCCCATGGAGAAGAAAATGAAAACTTTCAACGACGCAGCTATTGGATGCTTGAAGAGGATTTAATGCACATAGTTTTTGTTCACTATCTGGAAGTGAAGGGAACCAGAACTAATGTTGGAGCGCCAAGAGAGACTGATGCTTCATGTTCAAGAAAGAGCAGCCCTACAAGTACTAGTTTTTCCAAAAGTCATGCCAAATCAACTTCTGGTTATCTGGATTCCCTCACCACAACTAGCTCGTTGACTTCTTTGTGTGAAGATGCTGATTCTGAGGATGGCTACCAAGCAACTTCAAATTTCCATTCATTTCCGGAGTTGGCAACAGCACAAACCGGAAGCTCTCCTCTCTTGGCTCAGACGAACATTGGCTTCCCAGATTTTTATTACCAGCGTCCAATCACTGAGCAATCTCAACCAGCTCAGACAGATGGACTTATCGATTTCGATGAAAACTCTCGAGTGATTGATTCTCAAAAAACACTTGGTACGGCCTCTTGGGAAGAGATTTTACAACAGTGTACGAGTGGATCCCACTCTGGACAGTCTGCTGTTCCAACGTCTACAACGAGGCCTATTACATCAGGAATTGTTCCTGGTCAAGAAAATATTAATTCAAGCATTAATTTGTCAGTGGATAGTACTGTCCAAGAGGACCATGGAACTTCTATGGCAGTTTCATCAAATTGGCAGATTCCTGTTGTAGACAATTCATTATCCTTTCCAAAAGAGCATGTGAACCAATTATCAGAGCTTGAAACTGTTTATGATCTGGAGGCAGGTGTGTCTGGGCACAGAAATCAGGACGAAGTCTTTGAAAATTCTCAGAAGTTACATCTTTCTCATCTTGAAATGTTAAATGAACAACATATGTCGAGCAATCTTCAGTACCAACTAGCAAATGGAGAATCTCAGTGCTTGATGAAATTGAATTCTGAGAAAGACTTGATCCTGGATGGAAATGTTCACTATGCTTCAACTTTGCGACAATCACTCTTAGGAGGAGAAGAAGCTTTGAAAAAAGCTGACAGTTTTTCTCGCTGGATATATAGAGAATTAGGGGATGTTGATGATTTGCGTATGCATCCGTCCCCAGGAATTTCATGGAGTGCTGATGAATGTGGAAATATTCATGACGATTCCTCCTTGAGCCCCTCACTCTCTCAAGACCAGCTTTTCAGCATAACTGACTATTCTCCAAAGTGGTCATTCACAGACATGGAAACTGAGGTTCTGATTGTTGGACGATTTCTGGGGATTCACCAAGATGTTGCCAAATGTAATTGGTCATGTATGTTTGGGGAAGTAGAGGTTCCTGCAATGGTTTTGGCCGATGGAATTCTTTGTTGCCGTGCTCCGCCCCATAGTACAGGACAAGTGCCTTTTTATGTAACATTTTCAAACAGATTAGCTTGCAGTGAAGTGCGAGAATTTCAGTATCTGGCTGGCTCTGTCAAGGATGTGGATGTCACAGATATCTATGATGGTGGTACAAATGAATTACTTCTGCATTTGCAATTTGACAGCTTATTATCTCTGAATTGTCTAGCATCTCCTAGCAATATCTTTATAGATGATTTGGAAAAACGAAATGTAATTCGTAAACTTATTGCACTCAAGGAGGAAAAAGATTATATTGTTGAGCCAAATTCTCAGGACGAACTGATCCAGCAGGAGAAAAAGAACTATTTCTTTAAAATCTTGATGAAAGAAATGTTGTACTCATGGCTCCTTCATAAAGTTGTTGAAGATGGAAAAGGACCTAATGTGTGGGATGAAAATGGGCGAGGGGTAATTCATTTGGCTGCCGCTCTTGGTTATGATTGGGCCATGAAACCAATTGTGAGTGCAGGAGTTAGTATAAATTTCCGTGATGTCAATGGATGGACTGCACTTCACTGGGCAGCTTCCTGTGGCAGAGAGCAGATGGTTGCAGTTCTTATCGCTTTGGGCGGTGGCGCTGGTCTCTTGACAGATCCATCTCCTGAATATCCTTTGGGAAGAACACCTGCAGACCTCGCATCTGCCAACGGTCATAAAGGGATCTCTGGATTTTTGGCAGAATCTTCATTGACTAGCCATCTCTCAACTTTAACAATGAATGATACCAAGCAAGACAGTGAAGAAGTTTCATCTGCCAAAGTTGTGCATACTGTTTCTGAAAGAATTGCAACTCCTGCCAATGATGGTTATTTGCCTGGTGAACTGTCTCTAAAGGATTCACTCACAGCTGTTAGTCATGCAACACAAGTCGCTGATCGAATACATCTGATGTTCAGGATGCAGTCGTTTCAGAGGAAACAGTTTGCAGAACACGACGGTGATCAGTTTGAACTTTTAGATGATCGTACACTTTCAATTGTTGCTGCCAGAGCATTAAAGGGCGGACACGGCAACGGGCTTGCACATTCTGCCGCAATTCACATACAGAAAAAGTTTCGTGGTTGGAAAAAAAGAAAAGAGTTCTTGTTGATTCGTCAAAGAATAGTTAAAATACAGGCCCATGTAAGGGGACACCAGGTTCGGAAGAAATACCCATCAATGTTCTGGTCAATAGGAATTGTAGATACTTTATTGCGTTGGAGACGTAAAGGAAGCAGTCTACGGCCGATGGTGGTTCCTAAGGAACCTACCTCTGAAAGCATCCCAGAAGAGGATGACACTGATTTTTTGAAGAAAGGAAGGAGACAAACTGAGGAGAGGTTGCAAAAGGCACTTACTAGAGTTAAGTCTATGGCTCAGGATCCTCAGGGACGAGATCAGTACCGTAGGCTGCTAAATTTAGTACATGGGATTCGTGAAAACAAGGTGTCAGGTATGGCCGTTACAGGTTCAGAGAATAGGGTTGATGAGGAGCTGATTGACTTAGATGATATACTTGACGATGATGCCTTAATGTCTATAACATTTGATTGA 3222 42.02 MGDPGSYGLSPRLDIQQLLLEAKHRWLRPAEICEILRNYQMFRIESEPPHRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEENENFQRRSYWMLEEDLMHIVFVHYLEVKGTRTNVGAPRETDASCSRKSSPTSTSFSKSHAKSTSGYLDSLTTTSSLTSLCEDADSEDGYQATSNFHSFPELATAQTGSSPLLAQTNIGFPDFYYQRPITEQSQPAQTDGLIDFDENSRVIDSQKTLGTASWEEILQQCTSGSHSGQSAVPTSTTRPITSGIVPGQENINSSINLSVDSTVQEDHGTSMAVSSNWQIPVVDNSLSFPKEHVNQLSELETVYDLEAGVSGHRNQDEVFENSQKLHLSHLEMLNEQHMSSNLQYQLANGESQCLMKLNSEKDLILDGNVHYASTLRQSLLGGEEALKKADSFSRWIYRELGDVDDLRMHPSPGISWSADECGNIHDDSSLSPSLSQDQLFSITDYSPKWSFTDMETEVLIVGRFLGIHQDVAKCNWSCMFGEVEVPAMVLADGILCCRAPPHSTGQVPFYVTFSNRLACSEVREFQYLAGSVKDVDVTDIYDGGTNELLLHLQFDSLLSLNCLASPSNIFIDDLEKRNVIRKLIALKEEKDYIVEPNSQDELIQQEKKNYFFKILMKEMLYSWLLHKVVEDGKGPNVWDENGRGVIHLAAALGYDWAMKPIVSAGVSINFRDVNGWTALHWAASCGREQMVAVLIALGGGAGLLTDPSPEYPLGRTPADLASANGHKGISGFLAESSLTSHLSTLTMNDTKQDSEEVSSAKVVHTVSERIATPANDGYLPGELSLKDSLTAVSHATQVADRIHLMFRMQSFQRKQFAEHDGDQFELLDDRTLSIVAARALKGGHGNGLAHSAAIHIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQVRKKYPSMFWSIGIVDTLLRWRRKGSSLRPMVVPKEPTSESIPEEDDTDFLKKGRRQTEERLQKALTRVKSMAQDPQGRDQYRRLLNLVHGIRENKVSGMAVTGSENRVDEELIDLDDILDDDALMSITFD 1073
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 12049284 12061321 + Bda012667.1 Bda15g00806 22501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00806 1073 Pfam IQ calmodulin-binding motif 929 947 IPR000048 GO:0005515
Bda15g00806 1073 Pfam IQ calmodulin-binding motif 905 924 IPR000048 GO:0005515
Bda15g00806 1073 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Bda15g00806 1073 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 5 1073 - -
Bda15g00806 1073 Gene3D - 659 799 IPR036770 -
Bda15g00806 1073 SUPERFAMILY Ankyrin repeat 679 790 IPR036770 -
Bda15g00806 1073 Pfam IPT/TIG domain 496 581 IPR002909 -
Bda15g00806 1073 SMART CG_1_2 18 136 IPR005559 GO:0003677
Bda15g00806 1073 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 5 1073 - -
Bda15g00806 1073 ProSiteProfiles IQ motif profile. 904 933 IPR000048 GO:0005515
Bda15g00806 1073 SMART iq_5 903 925 IPR000048 GO:0005515
Bda15g00806 1073 SMART iq_5 926 948 IPR000048 GO:0005515
Bda15g00806 1073 ProSiteProfiles IQ motif profile. 927 951 IPR000048 GO:0005515
Bda15g00806 1073 MobiDBLite consensus disorder prediction 143 174 - -
Bda15g00806 1073 ProSiteProfiles Ankyrin repeat region circular profile. 729 753 - -
Bda15g00806 1073 SMART ANK_2a 768 797 IPR002110 GO:0005515
Bda15g00806 1073 SMART ANK_2a 696 725 IPR002110 GO:0005515
Bda15g00806 1073 SMART ANK_2a 729 758 IPR002110 GO:0005515
Bda15g00806 1073 Gene3D Immunoglobulins 490 586 IPR013783 -
Bda15g00806 1073 CDD IPT 496 583 - -
Bda15g00806 1073 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Bda15g00806 1073 Gene3D - 904 951 - -
Bda15g00806 1073 ProSiteProfiles Ankyrin repeat profile. 729 761 IPR002110 GO:0005515
Bda15g00806 1073 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 904 954 IPR027417 -
Bda15g00806 1073 SUPERFAMILY E set domains 497 582 IPR014756 -
Bda15g00806 1073 Coils Coil 997 1017 - -
Bda15g00806 1073 MobiDBLite consensus disorder prediction 144 174 - -
Bda15g00806 1073 Pfam Ankyrin repeats (3 copies) 701 790 IPR002110 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01181 Bda-Chr3:13857554 Bda15g00806 Bda-Chr15:12049284 3.06E-42 dispersed
Bda08g00183 Bda-Chr8:1671051 Bda15g00806 Bda-Chr15:12049284 1.93E-45 dispersed
Bda08g00311 Bda-Chr8:3247593 Bda15g00806 Bda-Chr15:12049284 2.50E-17 dispersed
Bda08g00378 Bda-Chr8:3870823 Bda15g00806 Bda-Chr15:12049284 2.17E-35 dispersed
Bda15g00806 Bda-Chr15:12049284 Bda01g01964 Bda-Chr1:56026064 1.73E-06 dispersed
Bda15g00806 Bda-Chr15:12049284 Bda03g00957 Bda-Chr3:8670113 3.21E-44 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17214 PF12796 Ank_2 1.60E-07 CL0465 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00806 K21596 - csv:101203707 1245.72