Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00847 ATGGACACTAAAACAGAAGATAATTCAGAATCATCTCAGCCTAACACCTCTGGTGTCATACCATCTGAAGCACAACATACTGCTGCTGTTACTGCTGAATCTGAGAATTTGAAACGCGACTTGCCATCTGGGCTATCTCCTACTAGCATATCTTCTTGGGCAAAAAATTTGAAGATTTCACAGTCTTTCGTTGGAAGACAAGATGGCTCACCTAATGCAAACGCAGGAAAGTCCAGTTTTTCACGTTTCACCAGTGGCATTGGTTTGCAATTGTCGCCAAAAGATCCTTCTCCAGATGCCTCTGACAAAACTTCAAAAGTTCCAGAACCTGGTTTATTTGGGTCACTCACAAAGGGTTTTGTTGAGTCTTCTAGAAGTGCTGTGAAGGCTGTACAGGCCAAAGCTAGGCATGCTGTCTCTCAAAATAAACGAAGATACCAGGAAGGCGGATTTGATTTGGATATGACATATATAACAGAGAACATAATTGCTATGGGATTCCCGGCTGGTGATATGAGTTCTGGGTTTTTTGGATATGTTGAGGGTTTCTACCGGAATCACATGGAAGAAGTTATAAAGTTCTTTGAAACTCATCACAAGGACAAATACAAAGTGTACAATCTTTGTTCTGAGAGGCTGTACGATGCTTCATTATTTGAAGGAAAGGTGGCTAGTTTTCCTTTTGATGATCATAATTGTCCCCCAGTTCGACTGATAATATCATTTTGTCAAAGTGCTTACTCATGGCTGAAAGAAGATATTGAAAATGTAGTGGTTGTGCACTGCAAAGCAGGAATGGCTAGGACAGGGTTGATGATATCTAGTCTTCTTTTATACCTGAAGTTTTTTCCAACTGCCGAGGAGTCCATTGACTACTACAACCAAAAAAGGTGCTTTGATGGCAGGGGCCTTATTCTACCTAGTCAGATTAGATATGTCAAATATTTCGAGCGTATATTAACATACTTCAATGGCGAAAATCCTCCTGGCCGTAGGTGCATGCTTAGGGGATTTCGGCTTCATAGATGTCCTTATTGGATCAGGCCCTCTATCACTGTGTCTGATCATAATGGTGTGTTATGTTGTATGGTCTCTGTTTCCCAGTTTGACTGTCATTTATTTTTGCAGCCGGAAGATTTTTGGTTCAGTGCACCAAAGAAGGGGGTAATCGTATTTGCTTTGCCTGGGGAACCTGGTTTAACAGAATTGGTGGGGGACTTCAAGATCCATTTCCATGATCGCCAAGGAGATTTCTACTGTTGGCTAAACACAACTATGACGGAAAACCGCAAAGTTCTCAACACCGATGATCTTGATGGGTTTGACAAGAGGAAACTACCTTCCCCAAGATTTCAGGTTGAGGTTGTTTTAGTGGATTATAATGGTAGCATTCCCACAACATCTAATACTACAAATAATACGAAGAACTCCGATGAAAGATCTAGTTCAACTCCTGCTCCAATTGATGACAGTGCAGCTCCTCCAAAACCTACGGAAAATCCTGTGAATGAGGACAAAGATGATGTGTTTTCAGACGGCGAAGCCGATGAAGGTGGTTCTTCAAAGTCCAAGCAAGGCTCAAGCTCGACCTCTAATTCCGCGAGTGCGGCTGAAGATCAAGTTGTGAATTTAACACGGGCAGCGGAGGATGTTTCTTTGCGAGACAACATGTCTAATCGAATTGAAACCTCCGGTGTGCTCAAAAGTGGTGGCAGGAGAGATGGTTCTGTCCAAGAAGCTCCAACCCCTGAAAGCGAGTTCAAGGCAATGGCTGCTGATGCTTCTGTTTTCACATTTGGCGATGAAGAGGATTATGAGAGTGATTAG 1827 42.58 MDTKTEDNSESSQPNTSGVIPSEAQHTAAVTAESENLKRDLPSGLSPTSISSWAKNLKISQSFVGRQDGSPNANAGKSSFSRFTSGIGLQLSPKDPSPDASDKTSKVPEPGLFGSLTKGFVESSRSAVKAVQAKARHAVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETHHKDKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPVRLIISFCQSAYSWLKEDIENVVVVHCKAGMARTGLMISSLLLYLKFFPTAEESIDYYNQKRCFDGRGLILPSQIRYVKYFERILTYFNGENPPGRRCMLRGFRLHRCPYWIRPSITVSDHNGVLCCMVSVSQFDCHLFLQPEDFWFSAPKKGVIVFALPGEPGLTELVGDFKIHFHDRQGDFYCWLNTTMTENRKVLNTDDLDGFDKRKLPSPRFQVEVVLVDYNGSIPTTSNTTNNTKNSDERSSSTPAPIDDSAAPPKPTENPVNEDKDDVFSDGEADEGGSSKSKQGSSSTSNSASAAEDQVVNLTRAAEDVSLRDNMSNRIETSGVLKSGGRRDGSVQEAPTPESEFKAMAADASVFTFGDEEDYESD 608
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 13141380 13151660 - Bda012723.1 Bda15g00847 22542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00847 608 Gene3D Protein tyrosine phosphatase superfamily 129 326 IPR029021 -
Bda15g00847 608 MobiDBLite consensus disorder prediction 462 488 - -
Bda15g00847 608 SMART PTEN_C2_2 328 459 IPR014020 -
Bda15g00847 608 ProSiteProfiles Phosphatase tensin-type domain profile. 144 323 IPR029023 -
Bda15g00847 608 MobiDBLite consensus disorder prediction 520 540 - -
Bda15g00847 608 CDD PTP_PTEN 154 319 IPR045101 GO:0016791
Bda15g00847 608 MobiDBLite consensus disorder prediction 8 32 - -
Bda15g00847 608 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2A 18 608 - -
Bda15g00847 608 MobiDBLite consensus disorder prediction 1 50 - -
Bda15g00847 608 ProSitePatterns Tyrosine specific protein phosphatases active site. 260 270 IPR016130 GO:0016311|GO:0016791
Bda15g00847 608 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 18 608 - -
Bda15g00847 608 MobiDBLite consensus disorder prediction 500 519 - -
Bda15g00847 608 MobiDBLite consensus disorder prediction 462 588 - -
Bda15g00847 608 MobiDBLite consensus disorder prediction 85 111 - -
Bda15g00847 608 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 237 297 IPR000387 GO:0016311|GO:0016791
Bda15g00847 608 ProSiteProfiles C2 tensin-type domain profile. 330 460 IPR014020 -
Bda15g00847 608 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 157 324 IPR029021 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda14g01451 Bda15g00847 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00247 Bda-Chr10:24282876 Bda15g00847 Bda-Chr15:13141380 0 dispersed
Bda15g00847 Bda-Chr15:13141380 Bda13g01705 Bda-Chr13:40391686 1.90E-20 dispersed
Bda14g01451 Bda-Chr14:19537856 Bda15g00847 Bda-Chr15:13141380 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00847 K01110 - zju:107426986 849.736