Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00853 ATGTCGAATCAAAAGAAGGATCCCTCCAAGCAGTTCGATCCATTCCATTACAATTATCAGGAAATCAGTCGGCCATGCTTTCCCTTCTTTGACGAGACTCCATCAGTATTTTACAGTCAACCACCTCCCTCACAGAACCTACATCAAGTGCTAGATCCTTCCTCCTACATGACCTTCACTGACTCTTTGCACACTTCTATGGATTATGACACCCTTTCAAGAGTCTTTGATTTGCCATGCTCCTCGTCGGAAATTGTATCTCCTATCGATAATGGCCGGAAGAAGGCCAGCGGGGTCGAAGAGTCGGGAGGGAAGGTTGAGATCCCATCGTCGCCGAATTCCTCAGTTTCTTCTTCGTCCAACGAGGGAGTTCGAGAAGAAGATTCGGGTAAGAAGGATGAGGATCGGGCAAAAGTTTGCGAAGATGGAGAAGAAGACAACTCCAAAAAAGGGAACAAATCTAAGAAGAAAGAGAAACGCCAGAGAGAGCCAAGGTTTGCTTTTCTGACCAAAAGCGAGATCGATCACCTTGAAGATGGTTACAGATGGAGAAAATACGGACAGAAAGCTGTCAAGAACAGCCCCTACCCAAGAAGCTATTACAGATGCACAACCCAGAAATGCCAAGTGAAAAAGAGAGTGGAAAGGTCATTTCAGGATCCTTCTGTGGTGATAACAACATACGAAGGGCAACATAATCACCAGTGCCCGGCGACCGTCCGTGGAAATGCGCCGGGAATGTTGTCCCCCTCCCTATTTGCGGCTGCGACGGCTTCTGGGCCTCCTTACCTTCCGCCGGATCTATTGTCTCAGCTTTTCCCATCGAATATTTCCCAAGTTGATGCAGGTGGTTCCGTGCTCTATCAAAACATAAATCTTCACCGCCACCATCTTCAGTTTCCTGACTATGGCTTACTGCAAGACTTACTTCCATCGGCATTCCCTCATAAGCAAGACCCATAA 963 47.35 MSNQKKDPSKQFDPFHYNYQEISRPCFPFFDETPSVFYSQPPPSQNLHQVLDPSSYMTFTDSLHTSMDYDTLSRVFDLPCSSSEIVSPIDNGRKKASGVEESGGKVEIPSSPNSSVSSSSNEGVREEDSGKKDEDRAKVCEDGEEDNSKKGNKSKKKEKRQREPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCQVKKRVERSFQDPSVVITTYEGQHNHQCPATVRGNAPGMLSPSLFAAATASGPPYLPPDLLSQLFPSNISQVDAGGSVLYQNINLHRHHLQFPDYGLLQDLLPSAFPHKQDP 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 13353748 13355148 - Bda012737.1 Bda15g00853 22548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00853 320 MobiDBLite consensus disorder prediction 124 152 - -
Bda15g00853 320 SMART WRKY_cls 177 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda15g00853 320 Gene3D WRKY domain 164 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda15g00853 320 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 313 IPR044810 GO:0003700
Bda15g00853 320 Pfam WRKY DNA -binding domain 178 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda15g00853 320 SUPERFAMILY WRKY DNA-binding domain 170 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda15g00853 320 PANTHER WRKY TRANSCRIPTION FACTOR 71-RELATED 1 313 - -
Bda15g00853 320 ProSiteProfiles WRKY domain profile. 172 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda15g00853 320 MobiDBLite consensus disorder prediction 86 164 - -
Bda15g00853 320 MobiDBLite consensus disorder prediction 107 123 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00076 Bda-Chr2:2990854 Bda15g00853 Bda-Chr15:13353748 6.27E-49 dispersed
Bda11g00494 Bda-Chr11:5270703 Bda15g00853 Bda-Chr15:13353748 5.51E-48 dispersed
Bda15g00853 Bda-Chr15:13353748 Bda13g00224 Bda-Chr13:2849666 2.51E-52 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17215 PF03106 WRKY 1.10E-25 CL0274 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00853 - - zju:107416121 359.762