Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda15g00853 | ATGTCGAATCAAAAGAAGGATCCCTCCAAGCAGTTCGATCCATTCCATTACAATTATCAGGAAATCAGTCGGCCATGCTTTCCCTTCTTTGACGAGACTCCATCAGTATTTTACAGTCAACCACCTCCCTCACAGAACCTACATCAAGTGCTAGATCCTTCCTCCTACATGACCTTCACTGACTCTTTGCACACTTCTATGGATTATGACACCCTTTCAAGAGTCTTTGATTTGCCATGCTCCTCGTCGGAAATTGTATCTCCTATCGATAATGGCCGGAAGAAGGCCAGCGGGGTCGAAGAGTCGGGAGGGAAGGTTGAGATCCCATCGTCGCCGAATTCCTCAGTTTCTTCTTCGTCCAACGAGGGAGTTCGAGAAGAAGATTCGGGTAAGAAGGATGAGGATCGGGCAAAAGTTTGCGAAGATGGAGAAGAAGACAACTCCAAAAAAGGGAACAAATCTAAGAAGAAAGAGAAACGCCAGAGAGAGCCAAGGTTTGCTTTTCTGACCAAAAGCGAGATCGATCACCTTGAAGATGGTTACAGATGGAGAAAATACGGACAGAAAGCTGTCAAGAACAGCCCCTACCCAAGAAGCTATTACAGATGCACAACCCAGAAATGCCAAGTGAAAAAGAGAGTGGAAAGGTCATTTCAGGATCCTTCTGTGGTGATAACAACATACGAAGGGCAACATAATCACCAGTGCCCGGCGACCGTCCGTGGAAATGCGCCGGGAATGTTGTCCCCCTCCCTATTTGCGGCTGCGACGGCTTCTGGGCCTCCTTACCTTCCGCCGGATCTATTGTCTCAGCTTTTCCCATCGAATATTTCCCAAGTTGATGCAGGTGGTTCCGTGCTCTATCAAAACATAAATCTTCACCGCCACCATCTTCAGTTTCCTGACTATGGCTTACTGCAAGACTTACTTCCATCGGCATTCCCTCATAAGCAAGACCCATAA | 963 | 47.35 | MSNQKKDPSKQFDPFHYNYQEISRPCFPFFDETPSVFYSQPPPSQNLHQVLDPSSYMTFTDSLHTSMDYDTLSRVFDLPCSSSEIVSPIDNGRKKASGVEESGGKVEIPSSPNSSVSSSSNEGVREEDSGKKDEDRAKVCEDGEEDNSKKGNKSKKKEKRQREPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCQVKKRVERSFQDPSVVITTYEGQHNHQCPATVRGNAPGMLSPSLFAAATASGPPYLPPDLLSQLFPSNISQVDAGGSVLYQNINLHRHHLQFPDYGLLQDLLPSAFPHKQDP | 320 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 13353748 | 13355148 | - | Bda012737.1 | Bda15g00853 | 22548 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda15g00853 | 320 | MobiDBLite | consensus disorder prediction | 124 | 152 | - | - | |
Bda15g00853 | 320 | SMART | WRKY_cls | 177 | 236 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda15g00853 | 320 | Gene3D | WRKY domain | 164 | 230 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda15g00853 | 320 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 1 | 313 | IPR044810 | GO:0003700 | |
Bda15g00853 | 320 | Pfam | WRKY DNA -binding domain | 178 | 235 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda15g00853 | 320 | SUPERFAMILY | WRKY DNA-binding domain | 170 | 237 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda15g00853 | 320 | PANTHER | WRKY TRANSCRIPTION FACTOR 71-RELATED | 1 | 313 | - | - | |
Bda15g00853 | 320 | ProSiteProfiles | WRKY domain profile. | 172 | 237 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda15g00853 | 320 | MobiDBLite | consensus disorder prediction | 86 | 164 | - | - | |
Bda15g00853 | 320 | MobiDBLite | consensus disorder prediction | 107 | 123 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00076 | Bda-Chr2:2990854 | Bda15g00853 | Bda-Chr15:13353748 | 6.27E-49 | dispersed | |
Bda11g00494 | Bda-Chr11:5270703 | Bda15g00853 | Bda-Chr15:13353748 | 5.51E-48 | dispersed | |
Bda15g00853 | Bda-Chr15:13353748 | Bda13g00224 | Bda-Chr13:2849666 | 2.51E-52 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17215 | PF03106 | WRKY | 1.10E-25 | CL0274 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda15g00853 | - | - | zju:107416121 | 359.762 |