Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda15g00854 | ATGTACTTCACCGTCGTCACTCTCTGTACCATTGGCTATGGCGATATAGTTCCGGATTCCACATTTACAAAAATTTTTACTTGCGTTTTCATACTTGTTGGTTTTGGATTCCTTGACATTTTGCTCAACGGATTGGTCGTTTACATATGCGATCGTCAAGAGGCGGTCTTGCTGAGTACCGTCGACGAGAATCGATTCAACGCCATGATTAGAACTTATATGGTCGACAGAGAAAAGGGAAGAATGAGAATAAGAACGAAGGTGTGTTTGGCTGTGGGTATTGTTATTATCTGCATTGCAGTAGGGACAATCGCCATACATTTTCTGGAGACATTAACTTGGGTTGATAGCATCTACCTCTCGATTACTTCTGTGTCAACAGTGGGCTATGGAGATTTCTCTTTCACGACTGTAGAAGGAAGGTGCTTTGCAATTATCTGGCTGTTGGTCAGCACTTTGGCTGTTGCCAGGGCCTTTCTGTATCTGACTGAGTTCAGGATCGACAAAAGAAACAGAAAAACCATGACGTGGGTTCTTCAGAAGAAGATAACGATTGGGGATTTAGTGGCTGCCGACATAGATCACAATGGATTTATCAGCAAATCTGAGTTTGTCATTTACAAGCTGAAAGAGATGGGGAAAATCTCAGAGAAAGATGTTGTAATGATCGGTAAACAATTTGATTTATTGGACTCGAGCAACTGTGGCAAAATAACACTAGCTGATCTCATGGAAGATTAA | 741 | 41.57 | MYFTVVTLCTIGYGDIVPDSTFTKIFTCVFILVGFGFLDILLNGLVVYICDRQEAVLLSTVDENRFNAMIRTYMVDREKGRMRIRTKVCLAVGIVIICIAVGTIAIHFLETLTWVDSIYLSITSVSTVGYGDFSFTTVEGRCFAIIWLLVSTLAVARAFLYLTEFRIDKRNRKTMTWVLQKKITIGDLVAADIDHNGFISKSEFVIYKLKEMGKISEKDVVMIGKQFDLLDSSNCGKITLADLMED | 246 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 13401791 | 13402668 | - | Bda012739.1 | Bda15g00854 | 22549 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda15g00854 | 246 | PRINTS | Two pore domain K+ channel signature | 126 | 135 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 | |
Bda15g00854 | 246 | PRINTS | Two pore domain K+ channel signature | 6 | 34 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 | |
Bda15g00854 | 246 | SUPERFAMILY | EF-hand | 190 | 244 | IPR011992 | - | |
Bda15g00854 | 246 | Pfam | Ion channel | 1 | 46 | IPR013099 | - | |
Bda15g00854 | 246 | Pfam | Ion channel | 94 | 164 | IPR013099 | - | |
Bda15g00854 | 246 | Gene3D | - | 188 | 246 | - | - | |
Bda15g00854 | 246 | Gene3D | - | 1 | 58 | - | - | |
Bda15g00854 | 246 | ProSitePatterns | EF-hand calcium-binding domain. | 192 | 204 | IPR018247 | - | |
Bda15g00854 | 246 | PANTHER | OS01G0696100 PROTEIN | 1 | 242 | - | - | |
Bda15g00854 | 246 | PANTHER | POTASSIUM CHANNEL, SUBFAMILY K | 1 | 242 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 | |
Bda15g00854 | 246 | Gene3D | - | 64 | 185 | - | - | |
Bda15g00854 | 246 | SUPERFAMILY | Voltage-gated potassium channels | 1 | 51 | - | - | |
Bda15g00854 | 246 | SUPERFAMILY | Voltage-gated potassium channels | 76 | 183 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda02g00075 | Bda-Chr2:2986172 | Bda15g00854 | Bda-Chr15:13401791 | 4.77E-108 | dispersed | |
Bda09g00436 | Bda-Chr9:5782644 | Bda15g00854 | Bda-Chr15:13401791 | 2.94E-55 | dispersed | |
Bda14g01437 | Bda-Chr14:18739862 | Bda15g00854 | Bda-Chr15:13401791 | 1.74E-171 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda15g00854 | K05389 | - | jre:109019999 | 413.69 |