Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00865 ATGTGCACGAGTATCGAAGTCGATGAGGTGAACCTTGACCGTGGCCTCCGTGTTCCATCGGAGGTTCAGCCGGTTACCGCCGGTGATGACTCTGACAGTGATGGGGAGGACCTCTTGTTTCCTCCTCTCAACTTCTCGGCGGTCGAAGCCGGTATTTTTCGCTCCGGCTTCCCCGATTACGCTAACTTCTCCTTTATTCGAACCCTAGGGCTCCGCTCCATCATATACCTGTGTCCAGAGCCTTATCCTGAGGCAAATATGGAGTTTCTCAAGTCTAATGGGATCACTTTGTATCAATTTGGAATTGAAGGCCATAAGGAGCCCTATGTAAACATCCCAGACAATAAAATTCGCGAGGCACTGAAAGTTATGCTTGACGTCAGGAATCACCCACTCCTAATTCACTGTAATAGAGGAAAGGTACGTGATTTCTTCTATATATTTTATGCTTTCTCCTTGTTATTTATGTTTATATATTTTGCTTTGAAATCCAGCATCGAACTGGTTGTTTGGTAG 516 45.54 MCTSIEVDEVNLDRGLRVPSEVQPVTAGDDSDSDGEDLLFPPLNFSAVEAGIFRSGFPDYANFSFIRTLGLRSIIYLCPEPYPEANMEFLKSNGITLYQFGIEGHKEPYVNIPDNKIREALKVMLDVRNHPLLIHCNRGKVRDFFYIFYAFSLLFMFIYFALKSSIELVVW 171
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 13817899 13819400 - Bda012752.1 Bda15g00865 22560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00865 171 Gene3D Protein tyrosine phosphatase superfamily 38 147 IPR029021 -
Bda15g00865 171 PANTHER TYROSINE-PROTEIN PHOSPHATASE 17 142 - -
Bda15g00865 171 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 40 142 IPR029021 -
Bda15g00865 171 Pfam Tyrosine phosphatase family 40 142 IPR004861 -
Bda15g00865 171 PRINTS Plant and fungal dual specificity phosphatase signature 95 109 IPR020428 GO:0016791
Bda15g00865 171 PRINTS Plant and fungal dual specificity phosphatase signature 39 56 IPR020428 GO:0016791
Bda15g00865 171 PRINTS Plant and fungal dual specificity phosphatase signature 76 89 IPR020428 GO:0016791
Bda15g00865 171 PRINTS Plant and fungal dual specificity phosphatase signature 112 126 IPR020428 GO:0016791
Bda15g00865 171 PANTHER - 17 142 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g01411 Bda-Chr14:17606706 Bda15g00865 Bda-Chr15:13817899 6.19E-69 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00865 K18045 - gmx:100814279 193.741