Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00870 ATGGAGATGAAGAGCGCAGTAGGAGAGATTGTTGAAGTCGATGGTGGTCATATCGTCCGTTCCACTGGCCGAAAAGACCGACACAGCAAGGTCTACACAGCGAAAGGCCCTCGCGACCGTCGTGTCCGGCTTTCAGCCCACACCGCAATTCAGTTCTACGACGTTCAAGATCGCTTAGGCTATGATCGACCCAGCAAAGCGGTCGATTGGCTTATAAAAAAGGCAAAGTCCGCTATTGACAAGCTCACAGAGTTACCGCCTTGCTATGCCACCACCATCGCTGCAGATGCTGACACGAATAATGGCGGTAACGAGATGGTGATTTCTGCAGATCAATCGGAGTCATCCGGATACAATTTGCACCTTCAAAGACATTTGGATGAGAATCCAGATAATAATAATTTGGGTTTCGTTCCTCCTCCGCTGTCTTCAGTTGCCCTAACAGACAGTATGAAAACCTTCTTCCCCACAAGCTCTGGGGCGTCCCCCATCAATTTCCAGACCTTCCCACCAGATATACTTTCACGAACAGCAAACCCCATTCAAGATCTTGGCCTTTCTCTCCATACTTTTCAAGATCCTGGTCTGATTCACTCTCAGGGAGAGTCAAACCACTCGCCACAGACCGATCAAAACCTTTTCTCCGGCTCGCATCAGGTAGGGTTTGAACCGAGTTACCAGAGAATGGCAGCTTGGGGAAATGATAGAGGCGCTGAACATGGAGGTGGGTTTGTTTTCAGCTCGCTGCCAATTTTCGGCCAGGGTGGCTCGGCTGCATTATCACAGAGGGGACCCCTTCAGTCCAGTTACTCACCTTCTGCGTCATTTCGTGGGTGGAACGATCTTTCAATTGCTGCATCCAAAGACCAGAAGACTCATTCACTTCACCAATCTTCGTTATTTGGCACTCGTTTCGTTTCTGATGGGCTACATGGCTTTTGCATTCCCGGACAGAGTCCGGCCGACGATGACAGCGGTATGGTTTCCGAACGATTGTCATCTTCTTCTATGAACTCCCACCGTTGA 1026 49.71 MEMKSAVGEIVEVDGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLTELPPCYATTIAADADTNNGGNEMVISADQSESSGYNLHLQRHLDENPDNNNLGFVPPPLSSVALTDSMKTFFPTSSGASPINFQTFPPDILSRTANPIQDLGLSLHTFQDPGLIHSQGESNHSPQTDQNLFSGSHQVGFEPSYQRMAAWGNDRGAEHGGGFVFSSLPIFGQGGSAALSQRGPLQSSYSPSASFRGWNDLSIAASKDQKTHSLHQSSLFGTRFVSDGLHGFCIPGQSPADDDSGMVSERLSSSSMNSHR 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 14028472 14029497 - Bda012763.1 Bda15g00870 22565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00870 341 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 3 340 IPR005333 GO:0003700
Bda15g00870 341 MobiDBLite consensus disorder prediction 316 341 - -
Bda15g00870 341 Pfam TCP family transcription factor 23 101 IPR017887 -
Bda15g00870 341 PANTHER TRANSCRIPTION FACTOR TCP4 3 340 - -
Bda15g00870 341 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00492 Bda-Chr6:6981959 Bda15g00870 Bda-Chr15:14028472 9.67E-16 dispersed
Bda13g01761 Bda-Chr13:40950714 Bda15g00870 Bda-Chr15:14028472 6.12E-20 dispersed
Bda15g00655 Bda-Chr15:10022440 Bda15g00870 Bda-Chr15:14028472 1.06E-13 dispersed
Bda15g00870 Bda-Chr15:14028472 Bda09g00872 Bda-Chr9:22314434 2.53E-24 dispersed
Bda15g00925 Bda-Chr15:16069852 Bda15g00870 Bda-Chr15:14028472 0 transposed
Bda14g01404 Bda-Chr14:17469804 Bda15g00870 Bda-Chr15:14028472 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17217 PF03634 TCP 5.30E-32 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00870 - - qsu:112040076 393.66