Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00885 ATGGAAGGCGACGACGAGTACAGAAGGAAAGAACGGGTCGCATTGGTGGCTATCGTGGTTCTCGCTTCCCTTGCCCTAGCTTCGCTGCTCGTCGCCTTCAGCTATTATTGCTACATTAGCAATAAGGTTTCCAAACGTCTTAGGACCCAGAAAAGTAAGCTTCGTTCTCTCTTTATAGGGAATAACAATGAAAATAAAGATGGTTTTGAAAATCTTAAAGTCGTTGCCGACGGAGGTCCCCAGGTTTTCACCTTTAAGCAGCTGCACTCAGCAACTGGTGGTTTCAGCAAGTCAAATGTGGTTGGACATGGCGGGTTTGGCTCAGTTTACAGAGGAGTTCTAAGCGATGGGCGGAAAGTTGCAATTAAGCTGATGGATCAGCCGGGAAAACAGGGCGAAGATGAATTTAAAGTGGAGGTGGAATTGTTAAGCCGACTTCATTCTCCATATTTACTTGCACTGCTCGGGTATTGCTCCGATAACAATCATAAGCTTCTCGTCTATGAATTCATGGCAAATGGAGGACTTCAGGAGCATCTTTATCCCATTCCCATGCAGCCTCCTCGAAGCTGGACTGGGAAACTACGGTTGAGAATTGCTCTTGAAGCTGCAAAGGGATTGGAGTATCTTCACGAACATGTAAGTCCGCCGGTTATTCACAGAGATTTCAAAAGCAGCAACATCCTCTTGGATAGATACTTCCACGCCAAAGTTTCAGATTTTGGGCTTGCGAAGATTGGGTCTGACAAAGTCGGAGGACATGTTTCAACACGAGTTTTAGGCACGCAAGGATATGTCGCTCCTGAGTATGCACTGACCGGACATTTGACGACAAAGTCAGACGCTTTGCCGAGGCTGACCGACAGAGAGAAAGTAGCGGAGATCATGGATCCCACGTTGGAGGGTCAGTACACAATGAAGGACGTGATTCAGGTGGCAGCCATCGCTGCTATGTGTGTTCAACCAGAGGCAGATTATAGGCCACTGATGGCTGATGTTGTCCATTCTCTTGTTCCGCTTGCCAAAAACAACCGAACAACCTCGAAGACCAACAATGCTGCGGATTTTATCGCCGTGAAGTCTCCTAGCCCTCAGGATGTCGGAAAAGCGAGAGTGGAAGACTAA 1125 47.47 MEGDDEYRRKERVALVAIVVLASLALASLLVAFSYYCYISNKVSKRLRTQKSKLRSLFIGNNNENKDGFENLKVVADGGPQVFTFKQLHSATGGFSKSNVVGHGGFGSVYRGVLSDGRKVAIKLMDQPGKQGEDEFKVEVELLSRLHSPYLLALLGYCSDNNHKLLVYEFMANGGLQEHLYPIPMQPPRSWTGKLRLRIALEAAKGLEYLHEHVSPPVIHRDFKSSNILLDRYFHAKVSDFGLAKIGSDKVGGHVSTRVLGTQGYVAPEYALTGHLTTKSDALPRLTDREKVAEIMDPTLEGQYTMKDVIQVAAIAAMCVQPEADYRPLMADVVHSLVPLAKNNRTTSKTNNAADFIAVKSPSPQDVGKARVED 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 14539865 14542655 + Bda012789.1 Bda15g00885 22580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00885 374 Pfam Protein kinase domain 96 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g00885 374 PANTHER OS07G0227300 PROTEIN 282 369 - -
Bda15g00885 374 PANTHER OS07G0227300 PROTEIN 2 281 - -
Bda15g00885 374 SUPERFAMILY Protein kinase-like (PK-like) 78 337 IPR011009 -
Bda15g00885 374 ProSitePatterns Protein kinases ATP-binding region signature. 101 123 IPR017441 GO:0005524
Bda15g00885 374 PANTHER OS01G0750732 PROTEIN 282 369 - -
Bda15g00885 374 PANTHER OS01G0750732 PROTEIN 2 281 - -
Bda15g00885 374 Gene3D Transferase(Phosphotransferase) domain 1 171 363 - -
Bda15g00885 374 Gene3D Phosphorylase Kinase; domain 1 59 170 - -
Bda15g00885 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Bda15g00885 374 ProSiteProfiles Protein kinase domain profile. 95 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g01055 Bda-Chr8:22669505 Bda15g00885 Bda-Chr15:14539865 9.27E-106 dispersed
Bda15g00885 Bda-Chr15:14539865 Bda13g00167 Bda-Chr13:2136918 7.19E-85 dispersed
Bda15g00885 Bda-Chr15:14539865 Bda01g00267 Bda-Chr1:27218381 1.82E-79 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70114 PF00069 Pkinase 3.60E-33 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00885 - - vvi:100252390 526.939