Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00897 ATGGCAGATGAATCACTGTATCCATCAATATATCAGAAGATATCTGGGAAGTCCTACCTGATTGGTAGAATCTCTCCCAACTTCCAGACAAGGGATTATTCTTCAACTTGTGCATATCTCAATAGAAGTCTGCAGAGTCCTCTACATCCAGCCTTCCAAGGCTCTGGTTTGGCTGTTGCCTCATCAATTTCTTCCATTTATGTACCAGCTCCAGCAGAGAAAGGTTTACAAGGCTTTCTTATTGATTTTCTAATGGGAGGGGTGTCTGCTGCCGTTTCCAAATCAGCTGCTGCTCCCATAGAGCGAGTTAAATTGCTTATTCAAAATCAAGATGAGATGATCAAAGCCGGTCGCTTATCTGAGCCTTATAAGGGAATTACTGATTGCTTTGCTAGAACTGTTAAGGATGAAGGCGTCTTAGCTCTTTGGAGAGGGAACAGCACTAATGTCATCAGATATTTCCCAACGCAGGCCTTGAATTTTGCTTTCAAGGATTACTTCAAGAGGCTGTTCAACTTCAAAAAAGACAGAGATGGTTACTGGAAATGGTTTGCTGGGAACTTGGCATCTGGTGGCGCTGCTGGTGCTTCTTCTCTTTTGTTTGTTTATTCCTTGGACTATGCTAGAACACGTCTGGCAAATGATGCCAAGTCTGCTAAAAAGGGTGGCGAAAGACAGTTTAATGGTTTAATTGATGTTTACAAGAAAACACTTAAATCGGATGGCATTGCTGGACTTTATCGTGGCTTTAACATCTCATGCATTGGAATTATTGTGTACCGTGGGCTTTATTTTGGAATGTATGACTCTCTGAAACCGGTGGTTCTGGTTGGTGGACTAGAGGACAGTTTCCTTGCTAGTTTCTTGCTTGGATGGGGTATCACAATAGGTGCTGGATTGGCCTCTTACCCGATTGACACTGTCCGAAGAAGGATGATGATGACCTCCGGAGAAGCTGTAAAATACAAAAGCTCAATGGACGCATTCAACCAAATCGTCCAGAAAGAAGGTGCTAAGTCCCTCTTCAAAGGTGCCGGAGCAAACATATTGCGTGCCGTTGCCGGTGCTGGTGTGCTGGCTGGCTATGATAAGCTGCAGATTCTCGTGTTTGGCAAGAAATACGGATCTGGGGGAGGT 1137 44.15 MADESLYPSIYQKISGKSYLIGRISPNFQTRDYSSTCAYLNRSLQSPLHPAFQGSGLAVASSISSIYVPAPAEKGLQGFLIDFLMGGVSAAVSKSAAAPIERVKLLIQNQDEMIKAGRLSEPYKGITDCFARTVKDEGVLALWRGNSTNVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKSAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFNISCIGIIVYRGLYFGMYDSLKPVVLVGGLEDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFNQIVQKEGAKSLFKGAGANILRAVAGAGVLAGYDKLQILVFGKKYGSGGG 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 14682227 14684620 - Bda033329 Bda15g00897 22592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00897 379 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-RELATED 5 379 - -
Bda15g00897 379 SUPERFAMILY Mitochondrial carrier 78 364 IPR023395 -
Bda15g00897 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 282 368 IPR018108 -
Bda15g00897 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 77 170 IPR018108 -
Bda15g00897 379 Gene3D Mitochondrial carrier domain 80 375 IPR023395 -
Bda15g00897 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 182 274 IPR018108 -
Bda15g00897 379 Pfam Mitochondrial carrier protein 79 174 IPR018108 -
Bda15g00897 379 Pfam Mitochondrial carrier protein 181 274 IPR018108 -
Bda15g00897 379 Pfam Mitochondrial carrier protein 283 369 IPR018108 -
Bda15g00897 379 PRINTS Mitochondrial carrier protein signature 82 95 IPR002067 GO:0055085
Bda15g00897 379 PRINTS Mitochondrial carrier protein signature 291 313 IPR002067 GO:0055085
Bda15g00897 379 PRINTS Mitochondrial carrier protein signature 95 109 IPR002067 GO:0055085
Bda15g00897 379 PRINTS Mitochondrial carrier protein signature 247 265 IPR002067 GO:0055085
Bda15g00897 379 PRINTS Mitochondrial carrier protein signature 145 165 IPR002067 GO:0055085
Bda15g00897 379 PRINTS Mitochondrial carrier protein signature 197 215 IPR002067 GO:0055085
Bda15g00897 379 PRINTS Adenine nucleotide translocator signature 123 144 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bda15g00897 379 PRINTS Adenine nucleotide translocator signature 156 168 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bda15g00897 379 PRINTS Adenine nucleotide translocator signature 79 91 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bda15g00897 379 PRINTS Adenine nucleotide translocator signature 287 303 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bda15g00897 379 PRINTS Adenine nucleotide translocator signature 182 195 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Bda15g00897 379 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 5 379 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda12g00154 Bda-Chr12:1375098 Bda15g00897 Bda-Chr15:14682227 0 dispersed
Bda12g00155 Bda-Chr12:1378087 Bda15g00897 Bda-Chr15:14682227 0 dispersed
Bda15g00897 Bda-Chr15:14682227 Bda13g01598 Bda-Chr13:39523926 1.28E-33 dispersed
Bda15g00897 Bda-Chr15:14682227 Bda05g00462 Bda-Chr5:50973577 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00897 K05863 - rcu:8269156 619.002