Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00905 ATGGCCAGGATCCTCGACAGACTATCATTTGGACTGTGGATTGCGACGGTGAGCTTGCTGCTGTCGGAAAATAGTTTGGTCGAGTCCACTCATCTTAAGCACAACGTCGCATCGGCGCATTGGCTTCCCGCTACAGCCACTTGGTACGGAAGCCCAGAAGGCGACGGAAGCGACGGAGGAGCGTGTGGGTATGGAAACTTAGTGGATGTGAAGCCATTGAGGGCAAGGGTAGGCGCGGTGAGCCCAGTTTTGTTCAAGAATGGCGAGGGCTGCGGAGCTTGCTTCAAGGTAAAGTGCTTGGACCAAACCATATGCACTAGACGAGCCGTGACTATAATCGTGACAGACGAGTGCCCCGGTGGATACTGTGCCGGTGGCCGCACCCACTTCGACCTCAGCGGCGCCGCCTTCGGCCGCATGGCTGTATCCGGTGAAAGTGGGCACCTCAGGAACCGAGGCGAAATCCCAGTCATCTACAAAAGGACTCAATGCAAATATCCCGGCAAGAACATAGCTTTCCACGTGAACGAAGGTTCGACAGATTACTGGTTCTCGCTCCTGGTTGAGTTCGAGGATGGCGATGGAGATATTGGGTCAATGCACATAAGAGAAGCAAGCTCTGGTATATGGTTGGAGATGAATCATCTATGGGGTGCGAGTTGGTGTATTATCGGAGGGCCTCTAAAAGGGCCATTTTCGGTGAAACTTAAGACATTGTCGACGGCCAGAACTCTATCAGCCAGAGACGTGATTCCAAGCAACTGGTCGCCTAAAGCCACTTATCCCTCTCGCTTGAAATTCATCTCCTAA 810 52.84 MARILDRLSFGLWIATVSLLLSENSLVESTHLKHNVASAHWLPATATWYGSPEGDGSDGGACGYGNLVDVKPLRARVGAVSPVLFKNGEGCGACFKVKCLDQTICTRRAVTIIVTDECPGGYCAGGRTHFDLSGAAFGRMAVSGESGHLRNRGEIPVIYKRTQCKYPGKNIAFHVNEGSTDYWFSLLVEFEDGDGDIGSMHIREASSGIWLEMNHLWGASWCIIGGPLKGPFSVKLKTLSTARTLSARDVIPSNWSPKATYPSRLKFIS 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 14858691 14860150 - Bda012815.1 Bda15g00905 22600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00905 269 PANTHER EXPANSIN-B3 29 268 - -
Bda15g00905 269 SUPERFAMILY Barwin-like endoglucanases 35 168 IPR036908 -
Bda15g00905 269 PRINTS Major pollen allergen Lol pI signature 239 256 IPR005795 GO:0005576|GO:0019953
Bda15g00905 269 PRINTS Major pollen allergen Lol pI signature 173 188 IPR005795 GO:0005576|GO:0019953
Bda15g00905 269 PRINTS Major pollen allergen Lol pI signature 189 204 IPR005795 GO:0005576|GO:0019953
Bda15g00905 269 PRINTS Major pollen allergen Lol pI signature 119 134 IPR005795 GO:0005576|GO:0019953
Bda15g00905 269 PRINTS Major pollen allergen Lol pI signature 79 90 IPR005795 GO:0005576|GO:0019953
Bda15g00905 269 PRINTS Major pollen allergen Lol pI signature 141 156 IPR005795 GO:0005576|GO:0019953
Bda15g00905 269 PRINTS Expansin/Lol pI family signature 40 55 IPR007118 GO:0005576
Bda15g00905 269 PRINTS Expansin/Lol pI family signature 210 224 IPR007118 GO:0005576
Bda15g00905 269 PRINTS Expansin/Lol pI family signature 152 168 IPR007118 GO:0005576
Bda15g00905 269 PRINTS Expansin/Lol pI family signature 81 99 IPR007118 GO:0005576
Bda15g00905 269 PRINTS Expansin/Lol pI family signature 58 76 IPR007118 GO:0005576
Bda15g00905 269 PRINTS Expansin/Lol pI family signature 249 263 IPR007118 GO:0005576
Bda15g00905 269 SMART dpbb_1 77 159 IPR007112 -
Bda15g00905 269 PANTHER EXPANSIN-LIKE PROTEIN B1 29 268 - -
Bda15g00905 269 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 59 169 IPR007112 -
Bda15g00905 269 Gene3D - 165 264 IPR036749 -
Bda15g00905 269 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 182 263 IPR007117 -
Bda15g00905 269 Gene3D - 25 164 IPR036908 -
Bda15g00905 269 SUPERFAMILY PHL pollen allergen 169 262 IPR036749 -
Bda15g00905 269 Pfam Lytic transglycolase 79 158 IPR009009 -
Bda15g00905 269 Pfam Expansin C-terminal domain 171 252 IPR007117 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00313 Bda15g00905 CCT
Bda13g00660 Bda15g00905 CCT
Bda14g00750 Bda15g00905 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00313 Bda-Chr6:5196199 Bda15g00905 Bda-Chr15:14858691 1.10E-147 dispersed
Bda11g00424 Bda-Chr11:4507453 Bda15g00905 Bda-Chr15:14858691 2.87E-70 dispersed
Bda13g00660 Bda-Chr13:7549017 Bda15g00905 Bda-Chr15:14858691 6.62E-147 dispersed
Bda14g00750 Bda-Chr14:5727761 Bda15g00905 Bda-Chr15:14858691 6.84E-175 dispersed
Bda15g00905 Bda-Chr15:14858691 Bda06g00062 Bda-Chr6:645092 4.85E-38 dispersed
Bda15g00903 Bda-Chr15:14795123 Bda15g00905 Bda-Chr15:14858691 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00905 K20628 - csv:101202998 437.573