Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda15g00908 | ATGGATTCATTCCCATTAAAGCTACTTTCATTCTTGCATAATTCTCTGTCCAAGAACGACGACGAAACTGAATTCGACTCTGCTGTGGATGATTCGAATTCTGTATGGAGAGAAGCTTTCTTGAAATCCTACAAGGCTATGGATAAGGAACTGAGATCACATTCCAATTTAGACTGCTTTTGCAGTGGTAGCACTGCAGTTACTATAGTGAAACAAGGGTCCAATCTGTTCATAGGGAGTGTAGGAGATTCTCGAGCAATCCTCGGCTCCAAGAATGCTCGGGATTCCATGATAGCGGTCCCGTTAACTGTCGATCTAAAGCCTGATTTGCCGAGTGAAGCCGAAAGGATAAAAAGGTGTAGAGGAAGGGTGTTTGCAATGCGAGATGAGCCTCTGGTTCCAAGAGTATGGCTGCCGTTTGATGATGCTCCGGGGCTAGCAATGGCTCGAGCTTTTGGCGATTTCTGTTTGAAGAACTATGGAGTTATCTCCATTCCTGAGTTTTCCCACAGGAAACTTACTGATAGAGATCAATTTGTTGTTGTAGCCTCTGATGGGATTTGGGATGTGTTGAGCAATGAAGAGGTAGTTGAGATAGTGTCTTCGGCCTCCACCCGATCATCAGCTGCTAGAATATTGGTCGAGTCTGCAACTCGTGAGTGGAGGCTCCAATACCCGACGTCGAAAATGGATGATTGTGCAGTGGTTTGCTTGTTTTTGGACGGAAAAATGGACCCTGAATCACATTGTGATGAACTTGGTTTTTCTTCTGCAACCATTCAAAGCTATAATTCTAGTAATGCCTTGGAATCCGAGGATGGCCAGAAGTCTGACCCATGTTTACAAAGAAACCAAACAGTCAGGTTCGCCAAAGAGAAGAATGAAGAAGTATCGGCTGAAGATCCGAACTGGTCCGGTTTGGAGGGCGTTACGCGAGTAAACTCACTCGTACAACTTCCGAGATTTTTTGAGGAAAAATGTTGA | 984 | 44.72 | MDSFPLKLLSFLHNSLSKNDDETEFDSAVDDSNSVWREAFLKSYKAMDKELRSHSNLDCFCSGSTAVTIVKQGSNLFIGSVGDSRAILGSKNARDSMIAVPLTVDLKPDLPSEAERIKRCRGRVFAMRDEPLVPRVWLPFDDAPGLAMARAFGDFCLKNYGVISIPEFSHRKLTDRDQFVVVASDGIWDVLSNEEVVEIVSSASTRSSAARILVESATREWRLQYPTSKMDDCAVVCLFLDGKMDPESHCDELGFSSATIQSYNSSNALESEDGQKSDPCLQRNQTVRFAKEKNEEVSAEDPNWSGLEGVTRVNSLVQLPRFFEEKC | 327 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 15 | 15019722 | 15020937 | + | Bda012821.1 | Bda15g00908 | 22603 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda15g00908 | 327 | CDD | PP2Cc | 10 | 240 | IPR001932 | - | |
| Bda15g00908 | 327 | Pfam | Protein phosphatase 2C | 17 | 215 | IPR001932 | - | |
| Bda15g00908 | 327 | SMART | PP2C_4 | 3 | 238 | IPR001932 | - | |
| Bda15g00908 | 327 | PANTHER | ALPHABET, ISOFORM E-RELATED | 22 | 294 | - | - | |
| Bda15g00908 | 327 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 240 | IPR001932 | - | |
| Bda15g00908 | 327 | SUPERFAMILY | PP2C-like | 28 | 242 | IPR036457 | - | |
| Bda15g00908 | 327 | Gene3D | - | 5 | 242 | IPR036457 | - | |
| Bda15g00908 | 327 | PANTHER | - | 22 | 294 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bda13g00655 | Bda15g00908 | CCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda13g00655 | Bda-Chr13:7507597 | Bda15g00908 | Bda-Chr15:15019722 | 5.19E-158 | dispersed | |
| Bda13g01843 | Bda-Chr13:42548903 | Bda15g00908 | Bda-Chr15:15019722 | 3.29E-100 | dispersed | |
| Bda15g00908 | Bda-Chr15:15019722 | Bda08g00363 | Bda-Chr8:3718709 | 3.62E-73 | dispersed | |
| Bda15g00908 | Bda-Chr15:15019722 | Bda06g00320 | Bda-Chr6:5253823 | 2.70E-169 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda15g00908 | - | - | rcu:8262108 | 496.508 |