Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00911 ATGGCTACCTCTGCCGTCCAACAGTCCTCCTTCGCCGGCCAGACTGCCCTCAAGCAGTCCAATGAGCTCCTACGCAAGGTTGGTGCCTCCGCCTCTAATGGCGGCCGTATCACCATGCGCCGGACTGTGAAGAGTGCTCCTCAAAGCATTTGGTACGGCCCTGATCGTCCGAAGTACTTGGGACCATTCTCCGAGCAAACTCCGTCGTACCTGACCGGAGAGTTCCCAGGAGACTATGGCTGGGACACCGCTGGTTTGTCGGCAGATCCCGAGACGTTCGCTAAGAATCGGGAGCTGGAAGTGATCCACAGCCGGTGGGCCATGCTTGGTGCTTTGGGTTGCGTCTTCCCGGAGATTCTATCGAAGAACGGCGTGAAGTTCGGCGAGGCAGTCTGGTTCAAAGCCGGATCTCAAATCTTCTCCGAGGGTGGCCTTGACTATCTCGGAAACCCGAATCTGATTCACGCTCAGAGCATTATAGCCATCTGGGCTTCACAGGTTGTCCTAATGGGGTTAATCGAAGGCTACAGAGTCGGCGGAGGGCCTCTCGGCGAAGGGCTCGACCCAATCTACCCAGGTGGATCATTTGATCCCCTCGGTTTGGCCGATGATCCAGAGGCGTTTGCAGAGTTGAAGGTGAAAGAGCTTAAGAACGGAAGACTTGCAATGTTCTCCATGTTTGGATTCTTCGTCCAGGCAATCGTCACCGGAAAAGGTCCGATCGAAAACCTGTCCGACCACCTGGCCGACCCAGTAGCCAATAACGCATGGGAATTATGGTTTTTTTTGTCAGGAGAGGAATCAGGAGAGGAGATTAGCACTCTCTTCCAATGGGAATTATGGTTTTTTTTGTCATCGACAATTGGATATAAATTGACTTTCAGGAAGGATATAGTCTAA 900 52.89 MATSAVQQSSFAGQTALKQSNELLRKVGASASNGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSIIAIWASQVVLMGLIEGYRVGGGPLGEGLDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWELWFFLSGEESGEEISTLFQWELWFFLSSTIGYKLTFRKDIV 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 15172748 15173730 + Bda012826.1 Bda15g00911 22606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00911 299 Gene3D Chlorophyll a/b binding protein domain 58 259 - -
Bda15g00911 299 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 258 - -
Bda15g00911 299 Pfam Chlorophyll A-B binding protein 68 233 IPR022796 -
Bda15g00911 299 SUPERFAMILY Chlorophyll a-b binding protein 50 260 - -
Bda15g00911 299 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 258 IPR001344 GO:0009765|GO:0016020
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda13g00597 Bda15g00911 CCT
Bda06g00422 Bda15g00911 CCT
Bda13g00597 Bda15g00911 ECH
Bda06g00422 Bda15g00911 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00422 Bda-Chr6:6327486 Bda15g00911 Bda-Chr15:15172748 0 dispersed
Bda15g00911 Bda-Chr15:15172748 Bda01g00815 Bda-Chr1:38644168 1.97E-146 dispersed
Bda15g00911 Bda-Chr15:15172748 Bda13g00597 Bda-Chr13:6963183 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00911 K08913 - zju:107416999 499.204