Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda15g00925 | ACAAAGCAAATTCTGGACCACAACGTTGAATATGCAAAGCCAAAGGCCCGGATGGAGATGAAGAGCGCAGTAGGAGAGATTGTTGAAGTCGATGGTGGTCATATCGTCCGTTCCACTGGCCGAAAAGACCGACACAGCAAGGTCTTCACAGCGAAAGGCCCTCGCGACCGTCGTGTCCGGCTTTCAGCCCACACCGCAATTCAGTTCTACGACGTTCAAGATCGCCTAGGCTATGATCGACCCAGCAAAGCGGTCGATTGGCTTATAAAAAAGGCAAAGTCCGCTATTGACAAGCTCACAGAGTTACCGCCTTGCTATGCCACCGCCATCGCTGCAGATGCTGACACGAATAATGGCGGTAACGAGATGGTGATTTCTGCAGATCAATCGGAGTCATCCGGATACAATTTGCACCTTCAAAGACATTTGGATGAGAATCCAGATAATAATAATTCGGGTTTCGTTCCTCCGCTGTCTTCAGTTGCCCTAACAGACAGTATGAAAACCTTCTTCCCCACAAGCTCTGGGGCGTCCCCCATCAATTTCCAGACCTTCCCACCAGATATACTTTCACGAGCCGCAAACCCCATTCAAGATCTTGGCCTTTCTCTCCATACTTTTCAAGATCCTGGTCTGATTCACTCTCAGGGAGAGCCAAACCACTCGCCACAGACCGATCAAAACCTTTTCTCTGGCTCGCATCAGGTAGGGTTTGAACCGAGTTACCAGAGAATGGCAGCTTGGGGAAATGATAGAGGCGCTGAACATGGAGGTGGGTTTGTTTTCAGCTCGCTGCCAATTTTCGGCCAGGGTGGCTCGGCTGCATTATCACAGAGGGGACCCCTTCAGTCCAGTTACTCACCTTCTGCGTCATTTCGTGGGTGGAACGATCTTTCAATTGCTGCATCCAAAGACCAGAAGACTCATTCACTTCACCAATCTTCGTTATTTGGCACTCGTTTCGTTTCTGATGGGCTACATGGCTTTTGCATTCCCGGACAGAGTCCGGCCGACGATGACAGCGGTATGGTTTCCGAACGATTGTCATCTTCTTCTATGAACTCCCACCGTTGA | 1074 | 50.0 | TKQILDHNVEYAKPKARMEMKSAVGEIVEVDGGHIVRSTGRKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLTELPPCYATAIAADADTNNGGNEMVISADQSESSGYNLHLQRHLDENPDNNNSGFVPPLSSVALTDSMKTFFPTSSGASPINFQTFPPDILSRAANPIQDLGLSLHTFQDPGLIHSQGEPNHSPQTDQNLFSGSHQVGFEPSYQRMAAWGNDRGAEHGGGFVFSSLPIFGQGGSAALSQRGPLQSSYSPSASFRGWNDLSIAASKDQKTHSLHQSSLFGTRFVSDGLHGFCIPGQSPADDDSGMVSERLSSSSMNSHR | 357 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 16069852 | 16070925 | + | Bda012848.1 | Bda15g00925 | 22620 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda15g00925 | 357 | MobiDBLite | consensus disorder prediction | 332 | 357 | - | - | |
Bda15g00925 | 357 | PANTHER | TRANSCRIPTION FACTOR TCP4 | 12 | 118 | - | - | |
Bda15g00925 | 357 | Pfam | TCP family transcription factor | 40 | 132 | IPR017887 | - | |
Bda15g00925 | 357 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 12 | 118 | IPR005333 | GO:0003700 | |
Bda15g00925 | 357 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 126 | 356 | IPR005333 | GO:0003700 | |
Bda15g00925 | 357 | PANTHER | TRANSCRIPTION FACTOR TCP4 | 126 | 356 | - | - | |
Bda15g00925 | 357 | ProSiteProfiles | TCP domain profile. | 41 | 99 | IPR017887 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda14g01404 | Bda-Chr14:17469804 | Bda15g00925 | Bda-Chr15:16069852 | 0 | dispersed | |
Bda15g00925 | Bda-Chr15:16069852 | Bda09g00872 | Bda-Chr9:22314434 | 2.56E-24 | dispersed | |
Bda15g00925 | Bda-Chr15:16069852 | Bda15g00870 | Bda-Chr15:14028472 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17221 | PF03634 | TCP | 1.20E-31 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda15g00925 | - | - | qsu:112040076 | 388.267 |