Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00925 ACAAAGCAAATTCTGGACCACAACGTTGAATATGCAAAGCCAAAGGCCCGGATGGAGATGAAGAGCGCAGTAGGAGAGATTGTTGAAGTCGATGGTGGTCATATCGTCCGTTCCACTGGCCGAAAAGACCGACACAGCAAGGTCTTCACAGCGAAAGGCCCTCGCGACCGTCGTGTCCGGCTTTCAGCCCACACCGCAATTCAGTTCTACGACGTTCAAGATCGCCTAGGCTATGATCGACCCAGCAAAGCGGTCGATTGGCTTATAAAAAAGGCAAAGTCCGCTATTGACAAGCTCACAGAGTTACCGCCTTGCTATGCCACCGCCATCGCTGCAGATGCTGACACGAATAATGGCGGTAACGAGATGGTGATTTCTGCAGATCAATCGGAGTCATCCGGATACAATTTGCACCTTCAAAGACATTTGGATGAGAATCCAGATAATAATAATTCGGGTTTCGTTCCTCCGCTGTCTTCAGTTGCCCTAACAGACAGTATGAAAACCTTCTTCCCCACAAGCTCTGGGGCGTCCCCCATCAATTTCCAGACCTTCCCACCAGATATACTTTCACGAGCCGCAAACCCCATTCAAGATCTTGGCCTTTCTCTCCATACTTTTCAAGATCCTGGTCTGATTCACTCTCAGGGAGAGCCAAACCACTCGCCACAGACCGATCAAAACCTTTTCTCTGGCTCGCATCAGGTAGGGTTTGAACCGAGTTACCAGAGAATGGCAGCTTGGGGAAATGATAGAGGCGCTGAACATGGAGGTGGGTTTGTTTTCAGCTCGCTGCCAATTTTCGGCCAGGGTGGCTCGGCTGCATTATCACAGAGGGGACCCCTTCAGTCCAGTTACTCACCTTCTGCGTCATTTCGTGGGTGGAACGATCTTTCAATTGCTGCATCCAAAGACCAGAAGACTCATTCACTTCACCAATCTTCGTTATTTGGCACTCGTTTCGTTTCTGATGGGCTACATGGCTTTTGCATTCCCGGACAGAGTCCGGCCGACGATGACAGCGGTATGGTTTCCGAACGATTGTCATCTTCTTCTATGAACTCCCACCGTTGA 1074 50.0 TKQILDHNVEYAKPKARMEMKSAVGEIVEVDGGHIVRSTGRKDRHSKVFTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLTELPPCYATAIAADADTNNGGNEMVISADQSESSGYNLHLQRHLDENPDNNNSGFVPPLSSVALTDSMKTFFPTSSGASPINFQTFPPDILSRAANPIQDLGLSLHTFQDPGLIHSQGEPNHSPQTDQNLFSGSHQVGFEPSYQRMAAWGNDRGAEHGGGFVFSSLPIFGQGGSAALSQRGPLQSSYSPSASFRGWNDLSIAASKDQKTHSLHQSSLFGTRFVSDGLHGFCIPGQSPADDDSGMVSERLSSSSMNSHR 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 16069852 16070925 + Bda012848.1 Bda15g00925 22620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00925 357 MobiDBLite consensus disorder prediction 332 357 - -
Bda15g00925 357 PANTHER TRANSCRIPTION FACTOR TCP4 12 118 - -
Bda15g00925 357 Pfam TCP family transcription factor 40 132 IPR017887 -
Bda15g00925 357 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 12 118 IPR005333 GO:0003700
Bda15g00925 357 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 126 356 IPR005333 GO:0003700
Bda15g00925 357 PANTHER TRANSCRIPTION FACTOR TCP4 126 356 - -
Bda15g00925 357 ProSiteProfiles TCP domain profile. 41 99 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda14g01404 Bda-Chr14:17469804 Bda15g00925 Bda-Chr15:16069852 0 dispersed
Bda15g00925 Bda-Chr15:16069852 Bda09g00872 Bda-Chr9:22314434 2.56E-24 dispersed
Bda15g00925 Bda-Chr15:16069852 Bda15g00870 Bda-Chr15:14028472 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17221 PF03634 TCP 1.20E-31 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00925 - - qsu:112040076 388.267