Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00959 ATGGCCAAAGGAAGTGGAGTCTCCTTTGATTCATCAGACCCATTTGTCTTCTTCCCCCACGAACCTACTGTTCTCAACTCATTCTCAGAACGTCACTGTATCAAAAACTTCGATCCCCCCGACTGCAGAGAACTCCTTTCAATTGATTCCACCCGTTCATCCTCTCCTTCTCCCACCATGAACTTCCCTCCCCCGTCTTCCGACGATAAACGGATGATCGTGGACGAGATGAACTTCTTCGCCGATGACAAACACCCTGATTCCTCCATTGACGCCGACGATAATAAACGCTCAGATATCCGGCGCACAAAGTTGGAGGTCAACGTTAACACTGGTTTGCATCTTCTAACCACTAATACCAGTAGCGATCAATCCATGGTGGACGACGGGGTATCTCCTGTCGCAGAAGATAAGAGATCTAAAAGTGAGTTGGTAGTAGTTTTGCAAGCTGAGGTAGAGAGGATGAACATGGAGAATCGACGTTTAAGAGATATGCTCAATCAAGTAAGCAGCAATTACCAGGCGTTGCAGATGCACTTAGTCAATTTAATGCAGGATAAAAAAACTGAGGAAATTGATAAACGCAGTGGAAATGTCGGAACACTGGTTCCGAGGCAATTCATGGATCTTGGTCTGGCTACTAATGCCGATGCCGATGAGCCGTCCCTGTCCTCATCAGAAGCGAATGACTGCCGGTCAGGATCACTGAGAAATAACGTAGAATTTGCATCGGAGGGTGCAGCGATCGAGAGAGAGAGAGAGAAGGAGAATAGTCCTAATCCAGTTTCTCAAGAACAGGGAGGAAGCAAGATTTCGAGATTTCATCCTGGTAAAGACGTTGATCAAACTGACGCAACCATGAGAAAGGCTCGAGTTTCTGTTAGAGCTCGAACTGAGGAGCCTATGATCACAGATGGATGTCAATGGAGGAAATACGGGCAGAAAATGGCGAAGGGAAACCCATGTCCTCGAGCTTATTATCGGTGTAGAATGGCCGCCGGCTGTCCGGTTCGAAAACAGGTGCAAAGGTGTGCAGAAGATCGGACGATTCTGACAACAACTTACGAAGGAAATCACAACCATCCATTACCGCCAGCGGCGATGGCGATGGCCTCAACGACATCATCTGCGGCGAGAATGCTACTATCGGGATCGACGTCGAGCGCCGATCATAGTCTGATGAACCCAAGTTTTCTGCCAAAAACTCTCCTCCTAGGCTCCTCAAACATGGCTACAATCTCAGCCTCCGCGCCGTTTCCTACTGTTACGCTAGACCTCACTCAAACACCCATCAACCCTTTACAATTCCAAAGGCCACAAAGCCCATTTCAAATCCCTTTTCCTAACCCATCTCCGAATTCCTCAGCCTCCTTCCTTCCTCAAATCTTAGGCCAGGCGTTGTACAACCAGTCTAAGTTCTCCGGGCTGCAAATGTCGCAAGAGAGCGGGGGCCAGTTGGGTCAGCAAGGCCCGACGGCTGAAACGCTCAGCGCTGCCATTACTGCAGATCCAAACTTCACGGCAGCGCTAGTCGCAGCAATCACATCTGTTATTGAAGGTGCTCAATCAGTCAAAAACAGCGACATGAATAACAGTAACAGTAGTACTAAAATCAGCAGTTCGAGTTTCTCAGGAAATTGA 1641 48.32 MAKGSGVSFDSSDPFVFFPHEPTVLNSFSERHCIKNFDPPDCRELLSIDSTRSSSPSPTMNFPPPSSDDKRMIVDEMNFFADDKHPDSSIDADDNKRSDIRRTKLEVNVNTGLHLLTTNTSSDQSMVDDGVSPVAEDKRSKSELVVVLQAEVERMNMENRRLRDMLNQVSSNYQALQMHLVNLMQDKKTEEIDKRSGNVGTLVPRQFMDLGLATNADADEPSLSSSEANDCRSGSLRNNVEFASEGAAIEREREKENSPNPVSQEQGGSKISRFHPGKDVDQTDATMRKARVSVRARTEEPMITDGCQWRKYGQKMAKGNPCPRAYYRCRMAAGCPVRKQVQRCAEDRTILTTTYEGNHNHPLPPAAMAMASTTSSAARMLLSGSTSSADHSLMNPSFLPKTLLLGSSNMATISASAPFPTVTLDLTQTPINPLQFQRPQSPFQIPFPNPSPNSSASFLPQILGQALYNQSKFSGLQMSQESGGQLGQQGPTAETLSAAITADPNFTAALVAAITSVIEGAQSVKNSDMNNSNSSTKISSSSFSGN 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 17679033 17681042 - Bda012910.1 Bda15g00959 22654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00959 546 Coils Coil 145 172 - -
Bda15g00959 546 MobiDBLite consensus disorder prediction 524 546 - -
Bda15g00959 546 SMART WRKY_cls 303 363 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda15g00959 546 MobiDBLite consensus disorder prediction 272 297 - -
Bda15g00959 546 SUPERFAMILY WRKY DNA-binding domain 297 364 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda15g00959 546 MobiDBLite consensus disorder prediction 46 68 - -
Bda15g00959 546 Gene3D WRKY domain 288 365 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda15g00959 546 MobiDBLite consensus disorder prediction 216 297 - -
Bda15g00959 546 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 57 537 IPR044810 GO:0003700
Bda15g00959 546 Pfam WRKY DNA -binding domain 305 362 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda15g00959 546 ProSiteProfiles WRKY domain profile. 298 364 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda15g00959 546 PANTHER OS05G0567200 PROTEIN 57 537 - -
Bda15g00959 546 MobiDBLite consensus disorder prediction 218 240 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00793 Bda-Chr4:57824886 Bda15g00959 Bda-Chr15:17679033 8.75E-31 dispersed
Bda05g00712 Bda-Chr5:55382542 Bda15g00959 Bda-Chr15:17679033 1.05E-90 dispersed
Bda06g01096 Bda-Chr6:38953946 Bda15g00959 Bda-Chr15:17679033 1.16E-57 dispersed
Bda15g00578 Bda-Chr15:9002564 Bda15g00959 Bda-Chr15:17679033 1.88E-56 dispersed
Bda15g00595 Bda-Chr15:9149910 Bda15g00959 Bda-Chr15:17679033 3.59E-55 dispersed
Bda15g00953 Bda-Chr15:17560389 Bda15g00959 Bda-Chr15:17679033 0 proximal
Bda02g00927 Bda-Chr2:49474415 Bda15g00959 Bda-Chr15:17679033 1.29E-138 transposed
Bda12g00922 Bda-Chr12:40323364 Bda15g00959 Bda-Chr15:17679033 5.34E-94 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17226 PF03106 WRKY 1.30E-23 CL0274 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00959 - - qsu:112033147 537.339