Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g00966 ATGGCTCAGTTACCTCCTAAGGTCCCAACCATGGCGTCCAATTGGCCGGAATTTTCCCACCAGAAGATACCCACAATGGTGGCCGGAGGAGGTTTTACGCCAAATGCAGCAGCTCACCACCCTTCGTGGGTAGATGAGTTCCTAGACTTCTCTTCGTCTCGACGCGGATCCCACCGCCGGTCTGTCAGCGATTCCATCGCATTTATGGAGATGCCCATGCTAGACGAATGCCGTGGCTCTGCGGCGAATCACGATGTCGTGGCCAACAACGAGTTCGATAGATTTGATGACGAGCAATTCATGTCCATGTTTACTGACGAAATCTCATCAGCGGTGGCCCCCACTGTGTCCTCCTCGAATCCTTCTACGCCGTCCGACCACAACAGCGTCGACGAGGAGAAAGAAGCCTTGCATAGCAACGACCAGAAGCAGAAGAAAAATGAATCGGAAGAGGTCCAAAGCCAATGCAAGTCGGAAAACCAAGCCCCAAACAGTACAGTCGCCAGCGCCGCCGCCGATAGGATAACCGATCCCAAAAGGGTCAAAAGAATCTTGGCGAACAGGCAGTCGGCGCAAAGATCAAGAGTCAGGAAACTGCAGTACATATCAGAGTTGGAACGTAGCGTCACTTCACTACAAGCTGAAGTTTCAGTTTTATCGCCGCGGGTGGCGTTTCTCGACCACCAAAGATTGCTTCTAAACGTAGATAACAGTGCTCTTAAGCAACGGATCGCCGCTCTCGCCCAGGATAAGATTTTTAAAGATGCTCATCAAGAAGCATTGAAGAGAGAAATTGAAAGACTGAGGCAAGTGTATCACCAGCAGAATCTAAAGAAGATGGAGAATACTGAGCATTCACCACCTTCTTCTGATTCACAGTCTGCAGCTGATAGAAAAGAAAACCTTCTTAACGCTTGA 918 49.78 MAQLPPKVPTMASNWPEFSHQKIPTMVAGGGFTPNAAAHHPSWVDEFLDFSSSRRGSHRRSVSDSIAFMEMPMLDECRGSAANHDVVANNEFDRFDDEQFMSMFTDEISSAVAPTVSSSNPSTPSDHNSVDEEKEALHSNDQKQKKNESEEVQSQCKSENQAPNSTVASAAADRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNLKKMENTEHSPPSSDSQSAADRKENLLNA 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 17824285 17825898 - Bda012922.1 Bda15g00966 22661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g00966 305 MobiDBLite consensus disorder prediction 154 171 - -
Bda15g00966 305 Coils Coil 258 278 - -
Bda15g00966 305 Gene3D - 178 281 - -
Bda15g00966 305 SUPERFAMILY Leucine zipper domain 179 233 IPR046347 GO:0003700|GO:0006355
Bda15g00966 305 MobiDBLite consensus disorder prediction 112 126 - -
Bda15g00966 305 MobiDBLite consensus disorder prediction 127 153 - -
Bda15g00966 305 PANTHER BASIC LEUCINE ZIPPER 61-LIKE 1 297 - -
Bda15g00966 305 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 182 197 IPR004827 GO:0003700|GO:0006355
Bda15g00966 305 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 177 229 IPR004827 GO:0003700|GO:0006355
Bda15g00966 305 Pfam Basic region leucine zipper 176 224 IPR004827 GO:0003700|GO:0006355
Bda15g00966 305 MobiDBLite consensus disorder prediction 273 305 - -
Bda15g00966 305 SMART brlzneu 175 239 IPR004827 GO:0003700|GO:0006355
Bda15g00966 305 MobiDBLite consensus disorder prediction 112 174 - -
Bda15g00966 305 PANTHER BASIC LEUCINE ZIPPER 34 1 297 - -
Bda15g00966 305 MobiDBLite consensus disorder prediction 281 305 - -
Bda15g00966 305 CDD bZIP_plant_RF2 180 230 IPR044759 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda14g00770 Bda15g00966 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00005 Bda-Chr1:289789 Bda15g00966 Bda-Chr15:17824285 0 dispersed
Bda15g00966 Bda-Chr15:17824285 Bda15g01010 Bda-Chr15:18817320 9.12E-22 dispersed
Bda14g00696 Bda-Chr14:5176848 Bda15g00966 Bda-Chr15:17824285 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17227 PF07716 bZIP_2 3.50E-09 CL0018 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g00966 - - qsu:112040072 416.387