Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda15g01009 | ATGTCACCGGAGGTCGGAAAATCCAGCAACATCAGGCGCATTGTGAGGATCCGTCAAATGCTTCAGCGGTGGCGAAACAAGGCTCGGACGACTGCTACCTCCCGCCTGCCGCCCGACGTTCCTTCCGGACACGTGGCCATCTGCGTGGGGAGCAACTGCCGGAGATTTATCGTGCGCGCGACGCATCTGAACCATCCGTTCTTCAAGAAGCTGCTCGTCGAAGCCGAAGAAGAGTACGGATTCACTAACCAAGGTCCTCTGTTAATACCATGCGAGGAGTCGGTTTTCGAGGACGTTCTCCGAGTGGTCACTCGGACCCAGTCGGAACGATTTTCTTCCGGTCTGGAGGATCGGCGGAGACGATGCCACGTGGATCTCCGAACGGACATCGGGTTTTTGGATCAATCCCGGCCGTTGCTTCGGGGGCTTTCTGAAAAGTCAGTCTATTAA | 450 | 56.22 | MSPEVGKSSNIRRIVRIRQMLQRWRNKARTTATSRLPPDVPSGHVAICVGSNCRRFIVRATHLNHPFFKKLLVEAEEEYGFTNQGPLLIPCEESVFEDVLRVVTRTQSERFSSGLEDRRRRCHVDLRTDIGFLDQSRPLLRGLSEKSVY | 149 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 15 | 18801532 | 18801981 | - | Bda012984.1 | Bda15g01009 | 22704 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda15g01009 | 149 | Pfam | Auxin responsive protein | 16 | 102 | IPR003676 | GO:0009733 | |
| Bda15g01009 | 149 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 7 | 142 | IPR003676 | GO:0009733 | |
| Bda15g01009 | 149 | PANTHER | SMALL AUXIN-UP RNA-RELATED | 7 | 142 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda01g00303 | Bda-Chr1:27961186 | Bda15g01009 | Bda-Chr15:18801532 | 1.09E-19 | dispersed | |
| Bda03g00282 | Bda-Chr3:2473500 | Bda15g01009 | Bda-Chr15:18801532 | 3.29E-60 | dispersed | |
| Bda11g01588 | Bda-Chr11:49213857 | Bda15g01009 | Bda-Chr15:18801532 | 6.07E-19 | dispersed | |
| Bda14g00585 | Bda-Chr14:4479893 | Bda15g01009 | Bda-Chr15:18801532 | 1.03E-82 | dispersed | |
| Bda14g00586 | Bda-Chr14:4482021 | Bda15g01009 | Bda-Chr15:18801532 | 2.10E-62 | dispersed | |
| Bda15g01009 | Bda-Chr15:18801532 | Bda15g01057 | Bda-Chr15:19671970 | 1.82E-18 | dispersed | |
| Bda15g01009 | Bda-Chr15:18801532 | Bda15g01059 | Bda-Chr15:19706294 | 5.69E-109 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda15g01009 | K14488 | - | jre:108986945 | 218.009 |