Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g01010 ATGGGCGATACTGAAGCAGCTCGAACAGATATAGGGCAAAACCTCCAATGCTCGCAAGGAACTTCTTCCTCGGCGTATCTAAAGCAAACTTTACCGATGAATCATCTCAATATTCCACAGTTGAACTCCACACAGTTCCGTTCGCGGCATTTTCCACCAATTGTTTTTGGAGATGGCAAAAAAATTGGGATACCACCGTCGCACCCTCATCAGATTCCGCCCATTTCGCAATATTCTCAGATCCCGATCCCTCGGCCGATAAACCAGCAGTATGCTTCACAGAATTATACATCGGGCCCTACTCATTCTCGATCACTGTCACAGTCATCGTTTTTCTCGCATGATTCATTGCCCCCATTGAGCCCCTCACCATTTCGCGACTCTCCAACTTCATCAATCTCAGACCAGGTTTCAGCCGATGCGTCAATGGAGGAGAGGGATGCGAGTTCACACTCTTTGTTGCCTCCCTCTCCTTATCCTAAAGGTCATTTTTCGAAAGCTGGTGATAGTTTTCCGCCTCGCAAAGCACATAGGAGGTCTAATAGTGATATTCCGTTTGGGTTTTCCTCAGTGATGCAATCTTCTCTTCCACTTCTTCCATTGAAGGGTGGTTCGGGCAGTTTAGAGAGGTCAGTGTCTGGTAATAAAGAAAATTTTCCGATGGCAAAGCCTTCTCACTTTGTCAAAAGAGAGTGCGATTGGGAAAGATGTGGGGACGAAAATGCAGAAGTAATGGGCGACAGGAAATCCGAAGGGGATGTCATGGATGATCTATTTTCAGCTTATATGAATTTGGATAATATCGATTCACTGAATTCGTCAGGGACTGACGAGAAGAACGTAATAGAGAATCGCGAAGATTTGGATAGCAGAGCCAGTGGAACGAAGACAAATGGAGGCGACAGCAGTGATAATGAAGCAGAAAGCAGTGTGAACGAAAATGGTGGAACCAATCAAAGGCCTGCAATGAGTTCTGCATCTGAGAAAAGGGAAGGGATCAAAAGAAGTGCCGGAGGAGACATTGCTCCGACCATTCGACATTATCGTAGTGTTTCAATGGATAGTTTCATGGGAAAGTTGCAGTTTGGCGAGGAGTCTCCAAAAATGCCACCTTCGCCCGGTGCCCATCCGAACCACCTTTCACCTAGCAATTTGGTGGATGGTAGTTCGATTCCTTTTAGCTTGGAGTTTGGAAATGGCGAGTTCAGCGGGGCTGAAATGAAGAAAATTATGGCAAATGACAAGCTTGCTGAGATTGCATTAACTGACCCAAAACGTGTTAAAAGGATCTTGGCAAATCGGCAATCGGCTGCTCGATCTAAGGAGCGGAAGATGAGGTATATTTCCGAGTTGGAACACAAGGTTCAAACTCTCCAAGCAGAAGCTACTACACTGTCTGCTCAGCTTACACTTCTTCAGAGAGATTCTGTGGGGCTCACAAACCAGAACAATGAGCTCAAGTTTCGTCTTCAATCCATGGAGCAACAAGCACAGCTCCGAGATGCCTTAAACGAAGCCTTGACGACAGAAGTACAGCGGCTAAAACTGGCAACGACAGACATAAGTGGGCAAACGTCGATGTTTCAGATGCAGCATAAAACCTCTCAGCTCAATGTCCACCCCCGCCAGAACGGCTCCGCATCTGCCAAACCGGAATCAGTTCAATAG 1668 46.52 MGDTEAARTDIGQNLQCSQGTSSSAYLKQTLPMNHLNIPQLNSTQFRSRHFPPIVFGDGKKIGIPPSHPHQIPPISQYSQIPIPRPINQQYASQNYTSGPTHSRSLSQSSFFSHDSLPPLSPSPFRDSPTSSISDQVSADASMEERDASSHSLLPPSPYPKGHFSKAGDSFPPRKAHRRSNSDIPFGFSSVMQSSLPLLPLKGGSGSLERSVSGNKENFPMAKPSHFVKRECDWERCGDENAEVMGDRKSEGDVMDDLFSAYMNLDNIDSLNSSGTDEKNVIENREDLDSRASGTKTNGGDSSDNEAESSVNENGGTNQRPAMSSASEKREGIKRSAGGDIAPTIRHYRSVSMDSFMGKLQFGEESPKMPPSPGAHPNHLSPSNLVDGSSIPFSLEFGNGEFSGAEMKKIMANDKLAEIALTDPKRVKRILANRQSAARSKERKMRYISELEHKVQTLQAEATTLSAQLTLLQRDSVGLTNQNNELKFRLQSMEQQAQLRDALNEALTTEVQRLKLATTDISGQTSMFQMQHKTSQLNVHPRQNGSASAKPESVQ 555
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 18817320 18819491 - Bda012985.1 Bda15g01010 22705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g01010 555 MobiDBLite consensus disorder prediction 531 555 - -
Bda15g01010 555 Gene3D - 424 476 - -
Bda15g01010 555 CDD bZIP_plant_RF2 426 475 IPR044759 GO:0003700|GO:0006355
Bda15g01010 555 Pfam bZIP transcription factor 425 479 IPR004827 GO:0003700|GO:0006355
Bda15g01010 555 MobiDBLite consensus disorder prediction 73 117 - -
Bda15g01010 555 PANTHER ZIPPER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 78 527 - -
Bda15g01010 555 SUPERFAMILY Leucine zipper domain 425 476 IPR046347 GO:0003700|GO:0006355
Bda15g01010 555 MobiDBLite consensus disorder prediction 58 184 - -
Bda15g01010 555 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 78 527 - -
Bda15g01010 555 MobiDBLite consensus disorder prediction 293 325 - -
Bda15g01010 555 Coils Coil 441 496 - -
Bda15g01010 555 MobiDBLite consensus disorder prediction 283 345 - -
Bda15g01010 555 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 423 486 IPR004827 GO:0003700|GO:0006355
Bda15g01010 555 SMART brlzneu 421 485 IPR004827 GO:0003700|GO:0006355
Bda15g01010 555 MobiDBLite consensus disorder prediction 361 385 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda13g01268 Bda-Chr13:35052375 Bda15g01010 Bda-Chr15:18817320 3.95E-06 dispersed
Bda14g00583 Bda-Chr14:4466701 Bda15g01010 Bda-Chr15:18817320 0 dispersed
Bda14g00696 Bda-Chr14:5176848 Bda15g01010 Bda-Chr15:18817320 1.14E-20 dispersed
Bda15g00966 Bda-Chr15:17824285 Bda15g01010 Bda-Chr15:18817320 9.12E-22 dispersed
Bda15g01010 Bda-Chr15:18817320 Bda15g01060 Bda-Chr15:19727057 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17228 PF00170 bZIP_1 1.70E-08 CL0018 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g01010 - - qsu:111995725 718.768