Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g01016 ATGACGAAGGACGTCTTGGAAGAGGGACGTGGAAACAAGGACTACGTCGACCCCCCACCTGCGCCGCTCATCGACCTAGGCGAGCTCAAGCAATGGTCTTTCTACAGAGCCCTCATCGCCGAGTTTATCGCCACTCTTCTCTTTCTCTACGTTACCGTAGCCACCGTCATCGGCAACAATAAGCAAGTCGGCGACTGTAACGGCGTCGGCCTTCTGGGTATCGCTTGGGCATTCGGCGGGATGATCTTCATCCTCGTCTACTGTACCGCTGGCATTTCCGGTAAGTTTCACTCTTATTCATTGAGATTTTCGTTGAATCCACGACATAGTTGCGATTTTTTGTTTGGGTTTGCAGGGGGTCATATCAACCCCGCAGTGACGTTCGGGCTGTTTTTGGCCAGAAAAGTGTCGCTTATTCGAGCTCAACATGGCGGCGGAGCCAACGTCGTTTCCGGTGGTTACACCAAAGGCACAGGTCTTGGTGCTGAAATTATCGGCACTTTCGTGCTTGTCTACACTGTTTTCTCTGCAACTGTTTTGGCTCCATTACCCATTGGGTTCGCCGTGTTTATGGTACACTTGGCTACCATTCCGATCACCGGAACTGGAATCAACCCCGCTCGGAGTTTCGGTGCCGCTGTTATCTTCAACAGCGAAAAAGCATGGGATGAGCAGTGGATCTTCTGGGTCGGGCCGTTCGTCGGAGCACTGGCGGCAGCGGCATACCACCAGTACATTCTGAGAGCGGCAGCCATTAAAGCTCTGGGATCATTCCGCAGCAACCCTACCAACTAA 795 52.7 MTKDVLEEGRGNKDYVDPPPAPLIDLGELKQWSFYRALIAEFIATLLFLYVTVATVIGNNKQVGDCNGVGLLGIAWAFGGMIFILVYCTAGISGKFHSYSLRFSLNPRHSCDFLFGFAGGHINPAVTFGLFLARKVSLIRAQHGGGANVVSGGYTKGTGLGAEIIGTFVLVYTVFSATVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSEKAWDEQWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNPTN 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 18987039 18988023 + Bda012994.1 Bda15g01016 22711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g01016 264 PRINTS Major intrinsic protein family signature 226 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda15g01016 264 PRINTS Major intrinsic protein family signature 36 55 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda15g01016 264 PRINTS Major intrinsic protein family signature 186 208 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda15g01016 264 PRINTS Major intrinsic protein family signature 78 102 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda15g01016 264 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 101 IPR034294 -
Bda15g01016 264 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 143 263 IPR034294 -
Bda15g01016 264 Gene3D Glycerol uptake facilitator protein. 142 264 IPR023271 -
Bda15g01016 264 Pfam Major intrinsic protein 143 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda15g01016 264 Pfam Major intrinsic protein 115 141 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda15g01016 264 Pfam Major intrinsic protein 28 94 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda15g01016 264 PANTHER BNAC03G65520D PROTEIN 1 101 - -
Bda15g01016 264 PANTHER BNAC03G65520D PROTEIN 116 141 - -
Bda15g01016 264 ProSitePatterns MIP family signature. 121 129 IPR022357 -
Bda15g01016 264 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 116 141 IPR034294 -
Bda15g01016 264 SUPERFAMILY Aquaporin-like 28 248 IPR023271 -
Bda15g01016 264 PANTHER BNAC03G65520D PROTEIN 143 263 - -
Bda15g01016 264 Gene3D Glycerol uptake facilitator protein. 22 141 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda15g01016 Bda-Chr15:18987039 Bda01g00276 Bda-Chr1:27389525 2.66E-121 dispersed
Bda15g01016 Bda-Chr15:18987039 Bda15g01030 Bda-Chr15:19294203 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g01016 K09872 - qsu:112010887 392.119