Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g01020 CTGATGGTGATGGACGACAACGAGAGCTGCGGTAGCAGAGCCCACGACGCTTCTTCTCCGGCTCAGACGCGCCTGAACAGGAGGAAGCTCGAGGTCTACAATGAGGTTCTGCGTCGTCTGAAGAACTCCGACAACCAGGAGGCTGTTCTGCCTGGTTTTGATGATGAGCTTTGGACTCACTTCAATCGCCTTCCCGCTCGGTATGCCCTTGATGTAAATGTGGAGAGGGCAGAGGATGTTCTTATGCATAAACGACTACTGCATTTAGCTCATGATCCTGAAAATAGACCTGCAATTGAAGTCCGACTGGTCCAGAGCAAATCATTTTTTTTTTCTGAACTAATGATGCCTTTCCTTTTGCTTATGGCACTTCCTTCACCCTGTCTTTTTTTATCTATAAGTCTACTTTCTTTGTCTGGGACCCTGGTGCACTTTTGTTTTCTCAGCATACACCCTCCTCCTGCCTTTGGTTCATCTCCTAACCTCGAAGCACTTGCACTTGAAGCTGATCAACTTCATGATTATGATGAGGAGCACTCTGTCCATGCCAGGACACAATTTTCCAGGCCGATGCACGAGATCACCTTCTCGACAGACGATAAGCCTAAACTTCTAAGTCAGTTGACGTCATTGCTTGCTGAGATTGGGCTGAATATTCAAGAAGCGCATGCATTTTCAACAATAGATGGTTACTCCTTAGATGTCTTTGTTGTTGATGGTTGGCCATATGAGGAAACGGAGCAGCTCAAAACTGCTCTAGAAAAGGAAGTGTTGAAGTTTGAGAGGAAGGATTGGCCAAATCATCAATCAGTTTCTCCAATGGGCGAGGATGATAAATTTGTTGTTAAATGTGAACCTGATCATGTAAGGATACCAACTGATGGGACTGATGTATGGGAAATCGATCCTAGATATTTGAGATTCGAGCATAAAGTTGCATCTGGATCATATGGTGATTTGTACAAAGGTACATACTGCAGCCAAGAAGTGGCTATTAAAGTCCTGAAACCTGAACGCCTAAATTCTGATATGCAACGAGATTTTGCTCAAGAAGTCTTTATTATGAGGAAAGTTAGGCACAAAAACGTTGTACAGTTTATAGGTGCATGTACCAAGCCTCCAAGCCTTTGCATTGTGACAGAGTTTATGTCTGGTGGAAGTGTGTATGACTACTTACATAAACAAAAAGGCATTTTTAAGCTTCCGTCCTTACTCAAGGTAGCAATCGATGTCTCCAAAGGAATGAATTACTTGCACCAAAATAATATAATCCACAGAGATTTGAAGGCTGCCAACCTTTTGATGGATGAGAACGAAGTCGTTAAGGTTGCGGATTTTGGAGTTGCTAGAGTAAAAGTACAGTCAGGAGTTATGACAGCTGAAACTGGGACATACAGATGGATGGCTCCAGAGGTAATAGAACACAAACCCTATGATCATAAGGCTGATGTTTTCAGTTTTGGAATTGTATTGTGGGAGTTACTGACTGGAAAGCTTCCTTATGAATATTTAACCCCTTTACAAGCTGCCGTTGGTGTGGTTCAAAAGAGTATGAGGCCTACTATTTCAAAGAACACTCATCCAAAGCTAGTTAACTTAATGGAGATGTGCTGGCAACAAGATCCAGCAGCAAGACCCGACTTTTCAGAAATCTTGTCAATATTGCTGCAATTAGCCAAGGAGGTTGGAGATGATGGAGACGAACGGCGCAAGGAAAAATCTACCGGAGGAATTCTATCCATTCTGAGGCGAAATCATATCTAG 1764 43.08 LMVMDDNESCGSRAHDASSPAQTRLNRRKLEVYNEVLRRLKNSDNQEAVLPGFDDELWTHFNRLPARYALDVNVERAEDVLMHKRLLHLAHDPENRPAIEVRLVQSKSFFFSELMMPFLLLMALPSPCLFLSISLLSLSGTLVHFCFLSIHPPPAFGSSPNLEALALEADQLHDYDEEHSVHARTQFSRPMHEITFSTDDKPKLLSQLTSLLAEIGLNIQEAHAFSTIDGYSLDVFVVDGWPYEETEQLKTALEKEVLKFERKDWPNHQSVSPMGEDDKFVVKCEPDHVRIPTDGTDVWEIDPRYLRFEHKVASGSYGDLYKGTYCSQEVAIKVLKPERLNSDMQRDFAQEVFIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKQKGIFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKVQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAVGVVQKSMRPTISKNTHPKLVNLMEMCWQQDPAARPDFSEILSILLQLAKEVGDDGDERRKEKSTGGILSILRRNHI 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 19128759 19134396 + Bda013001.2 Bda15g01020 22715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g01020 587 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 14 568 - -
Bda15g01020 587 CDD STKc_MAP3K-like 312 555 - -
Bda15g01020 587 SMART serkin_6 306 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g01020 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Bda15g01020 587 ProSiteProfiles Protein kinase domain profile. 306 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda15g01020 587 Coils Coil 243 263 - -
Bda15g01020 587 CDD ACT_TyrKc 191 258 - -
Bda15g01020 587 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 14 568 - -
Bda15g01020 587 SUPERFAMILY Protein kinase-like (PK-like) 292 555 IPR011009 -
Bda15g01020 587 Gene3D Transferase(Phosphotransferase) domain 1 385 578 - -
Bda15g01020 587 ProSiteProfiles ACT domain profile. 193 265 IPR002912 -
Bda15g01020 587 Gene3D Phosphorylase Kinase; domain 1 296 384 - -
Bda15g01020 587 MobiDBLite consensus disorder prediction 1 23 - -
Bda15g01020 587 SUPERFAMILY ACT-like 191 256 IPR045865 -
Bda15g01020 587 Pfam Protein tyrosine and serine/threonine kinase 306 554 IPR001245 GO:0004672|GO:0006468
Bda15g01020 587 PRINTS Tyrosine kinase catalytic domain signature 380 393 IPR001245 GO:0004672|GO:0006468
Bda15g01020 587 PRINTS Tyrosine kinase catalytic domain signature 463 473 IPR001245 GO:0004672|GO:0006468
Bda15g01020 587 PRINTS Tyrosine kinase catalytic domain signature 482 504 IPR001245 GO:0004672|GO:0006468
Bda15g01020 587 PRINTS Tyrosine kinase catalytic domain signature 417 435 IPR001245 GO:0004672|GO:0006468
Bda15g01020 587 PRINTS Tyrosine kinase catalytic domain signature 526 548 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda06g00467 Bda15g01020 CCT
Bda14g00632 Bda15g01020 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00467 Bda-Chr1:31775580 Bda15g01020 Bda-Chr15:19128759 0 dispersed
Bda11g01817 Bda-Chr11:53342819 Bda15g01020 Bda-Chr15:19128759 0 dispersed
Bda13g00006 Bda-Chr13:49226 Bda15g01020 Bda-Chr15:19128759 0 dispersed
Bda03g00074 Bda-Chr3:780471 Bda15g01020 Bda-Chr15:19128759 3.40E-19 transposed
Bda14g00632 Bda-Chr14:4747419 Bda15g01020 Bda-Chr15:19128759 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70120 PF07714 PK_Tyr_Ser-Thr 1.70E-73 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g01020 - - csv:101213048 913.679