Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g01024 ATGGGCGTCGAACTAAACAATCACGACATGGAAGAGGGAACACTGGAGGTTGGCATGGAGTACCGAACTGTTTCTGGGGTTGCTGGACCTTTGGTTATACTAGATAAAGTTAAGGGACCCAAATTCCAGGAAATCGTTAATATTTGCTTAGGAGACGTTTTTGAAGGAACTTCGGGAATTGACAACAAATATACGACTGTGCAATTCACTGGAGAGGTCTTGAAAACCCCAGTTTCATTGGATATGCTTGGCCGCATATTTAATGGCTCTGGAAAACCCATTGATAATGGCCCTCCTATTTTGCCTGAGGCATACTTGGATATTTCTGGTGATTCTATTAATCCAAGTGAGAGAACATATCCAGAAGAGATGATACAGACTGGTATTTCTACCATTGATGTTATGAACTCCATTGCTAGAGGACAAAAGATTCCACTCTTTTCGGCTGCTGGTCTTCCCCATAATGAAATAGCTGCACAAATATGTCGGCAGGCTGGTTTAGACGGGGAAGAAGACAATTTTGCTATTGTTTTTGCAGCGATGGGTGTGAACATGGAAACTGCACAGTTTTTCAAACGAGATTTTGAAGAAAATGGATCAATGGAGAGAGCTAATGATCCTACCATTGAGCGTATTATTACTCCTCGTATTGCTCTTACTACCGCCGAGTATTTGGCTAATGAATGTGGGAAGCACGTTCTTGTCATCTTGACTGATATGAGTTCTTATGCTGATACTCTTCGTGAAGTAAATTTTTGTGAAAAGCAGAAAATTGAGACAAACTTCTGCTTTCTGTTGCAGGTGTCTGCTGCTCGGGAGGAAGTACCTGGAAGGCGTGGATATCCTGGTTATATGTATACTGATCTGGCCACAATATATGAGCGTGTAGGACGAATTGAAGGACGAAAAGGCTCCATCACCCAAATTCCAACTCTTACTACGCCTAATGATGATATCACGCATCCAACACCAGATCTTACTGGATATATCACCATTTATCCACCAATCAACGTCCTGCCTTCATTATCTCGTCTCATGAAGAGTGCTATTGGCGAGGGAATGACTCGTAGGGATCATGCTGATGTCTCCAATCAGCTCTATGCAAATTATGCAATTGGGAAGGATGTTCAGGCAATGAAAGCTGTGGTTGGAGAAGAAGAGCTTCTTTATCTGGAATTCTTGGACAAATTTGAGAGGAAGTTTGTCACACAAGGAGCCGACGACACCCGTAATATCTTCCAGTTACTCGATTTAGCGTGGACGTTGCTTGGAATTTTCCCCTGTGAGCTCCTCCACCGTATACCGACAAAGACCCTCGATCAGTACTACAGCCGAGAAACCGCTAATTAA 1350 42.96 MGVELNNHDMEEGTLEVGMEYRTVSGVAGPLVILDKVKGPKFQEIVNICLGDVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGDSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLDGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERANDPTIERIITPRIALTTAEYLANECGKHVLVILTDMSSYADTLREVNFCEKQKIETNFCFLLQVSAAREEVPGRRGYPGYMYTDLATIYERVGRIEGRKGSITQIPTLTTPNDDITHPTPDLTGYITIYPPINVLPSLSRLMKSAIGEGMTRRDHADVSNQLYANYAIGKDVQAMKAVVGEEELLYLEFLDKFERKFVTQGADDTRNIFQLLDLAWTLLGIFPCELLHRIPTKTLDQYYSRETAN 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 19195465 19199077 - Bda013006.1 Bda15g01024 22719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g01024 449 CDD V_A-ATPase_B 73 345 - -
Bda15g01024 449 PANTHER V-TYPE PROTON ATPASE SUBUNIT B1-RELATED 3 449 - -
Bda15g01024 449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 349 IPR027417 -
Bda15g01024 449 CDD ATP-synt_V_A-type_beta_N 20 72 - -
Bda15g01024 449 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 128 331 IPR000194 GO:0005524
Bda15g01024 449 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 3 449 IPR022879 -
Bda15g01024 449 ProSitePatterns ATP synthase alpha and beta subunits signature. 334 343 IPR020003 GO:0005524
Bda15g01024 449 Gene3D - 29 255 - -
Bda15g01024 449 Gene3D - 263 449 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda14g00625 Bda15g01024 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda15g01024 Bda-Chr15:19195465 Bda10g01161 Bda-Chr10:45655174 2.46E-20 dispersed
Bda14g00625 Bda-Chr14:4693528 Bda15g01024 Bda-Chr15:19195465 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g01024 K02147 - tcc:18604310 761.14