Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g01025 ATGTTATCGAAATTAGTAAACTTTCTGACGGCCTGTTTCCGGTCTCGGTCGGATGGAATAGTCGGTCCGATAACCGGATCCAGACAGGAAGGGCTGCTTTGGTACAAAGACATCGGACATCATCTGAACGGTGAGTTTTCAATGGCTATAGTTCAAGCCAACAATTTACTCGAGGATCAGAGCCAGGTTGAGTCAGGAAGCTTGAGCTCGAATGATTCTGGTCCGTATGGTGTATTTGTCGGCGTATACGACGCCCATGGAGGACCCGAGGCTTCTCGCTATCTAACCGACCACCTCTTACAACATCTCAAAAGGTTTGCTTCTGAGAGCCGCTCCATGTCTGTTGACGTAATTCGCAAGGCAATTCAAGCAACCGAGGAGGGTTTTACAGCTTTGGTCGCAGAACAATGGCCGATGAAACCGCGAATCGCAGTTGTTGGATCTTGCTGTCTCGTCGGGGTCATATGCAGCGAATATCTTTACATCGCCAACCTCGGCGATTCTCGTGCTGTTTTGGGACGAGTTGTGAAAGCGACGGGGGAGGTTCTGTCGATTCAATTGTCAGCCGAGCACAATGCGAGTATAGAGTCCGTGAGACAAGAGCTGCAATCTTTCTTTCATTCGAAGTCAAAGCACATAGATATCAGGTATCATTGGATACGAGATGTGTTGGACAACAAGCAAGGAAGTGCAAGGAGGGTGGTGAGAGCTGCTCTGCAAGAAGCAGCAAAGAAGAGAGAAATGAGATATTCTGACTTGAAGAAGATCAATAGAGGGGCCCGGAGGCATTTCCACGATGATATCACGGTGATTATCGTATTTCTCGACTCCGACCTGATTTGCCGGGCGTGCTCGGCAAAGGGCCCGACTGTGTCGGCGAGAGGAGGTGGAATTCATCTCCCTAATAACACCTTGGCTCCAGAATCTAGTGCACCTGATCGAAATCTTGACGTTAGTCGCTGA 963 49.12 MLSKLVNFLTACFRSRSDGIVGPITGSRQEGLLWYKDIGHHLNGEFSMAIVQANNLLEDQSQVESGSLSSNDSGPYGVFVGVYDAHGGPEASRYLTDHLLQHLKRFASESRSMSVDVIRKAIQATEEGFTALVAEQWPMKPRIAVVGSCCLVGVICSEYLYIANLGDSRAVLGRVVKATGEVLSIQLSAEHNASIESVRQELQSFFHSKSKHIDIRYHWIRDVLDNKQGSARRVVRAALQEAAKKREMRYSDLKKINRGARRHFHDDITVIIVFLDSDLICRACSAKGPTVSARGGGIHLPNNTLAPESSAPDRNLDVSR 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 19217571 19224377 - Bda013007.1 Bda15g01025 22720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g01025 320 Gene3D - 218 277 IPR036457 -
Bda15g01025 320 Pfam Protein phosphatase 2C 71 194 IPR001932 -
Bda15g01025 320 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 211 - -
Bda15g01025 320 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 226 307 - -
Bda15g01025 320 CDD PP2Cc 46 275 IPR001932 -
Bda15g01025 320 Gene3D - 36 215 IPR036457 -
Bda15g01025 320 PANTHER ALPHABET, ISOFORM E-RELATED 5 211 - -
Bda15g01025 320 PANTHER ALPHABET, ISOFORM E-RELATED 226 307 - -
Bda15g01025 320 SMART PP2C_4 37 273 IPR001932 -
Bda15g01025 320 SUPERFAMILY PP2C-like 54 276 IPR036457 -
Bda15g01025 320 ProSiteProfiles PPM-type phosphatase domain profile. 42 275 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda08g00984 Bda15g01025 CCT
Bda14g00624 Bda15g01025 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01185 Bda-Chr3:14072695 Bda15g01025 Bda-Chr15:19217571 2.04E-74 dispersed
Bda14g00960 Bda-Chr14:7730172 Bda15g01025 Bda-Chr15:19217571 1.23E-33 dispersed
Bda14g00978 Bda-Chr14:7906517 Bda15g01025 Bda-Chr15:19217571 1.36E-33 dispersed
Bda15g01025 Bda-Chr15:19217571 Bda14g00327 Bda-Chr14:2222047 8.60E-23 dispersed
Bda14g00624 Bda-Chr14:4685272 Bda15g01025 Bda-Chr15:19217571 6.04E-42 wgd
Bda15g01025 Bda-Chr15:19217571 Bda08g00984 Bda-Chr8:19880455 1.56E-109 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g01025 - - pper:18767510 326.635