Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g01030 ATGACGAAGGACGTCTTGGAAGAGGGACGTGGAAACAAGGACTACGTCGACCCCCCACCTGCGCCGCTCATCGACCTAGGCGAGCTCAAGCAATGGTCTTTCTACAGAGCCCTCATCGCCGAGTTTATCGCCACTCTTCTCTTTCTCTACGTTACCGTAGCCACCGTCATCGGCAACAATAAGCAAGTCGGCGACTGTAACGGCGTCGGCCTTCTGGGTATCGCTTGGGCATTCGGCGGGATGATCTTCATCCTCGTCTACTGTACCGCTGGCATTTCCGGTAAGTTTCACTCTTATTCATTGAGATTTTCGTTGAATCCACGACATAGTTATGATTTTTTGTTTGGGTTTGCAGGGGGTCATATCAACCCGGCAGTGACGTTCGGGCTGTTTTTGGCCAGAAAAGTGTCGCTTATTCGAGCTTTCGCTTACATGATGGCTCAGTGTCTGGGAGCTATCGTCGGCGTTGGGTTGGTCAAAGCCTTTATGAAGCACGACTATAACAACAATGGCGGCGGAGCCAACGTCGTTTCCGGTGGTTACACCAAAGGCACAGGTCTTGGTGCTGAAATTATCGGCACTTTCGTGCTTGTCTACACTGTTTTCTCTGCAACTGACCCAAAAAGGAGCGCCCGCGACTCTCACGTCCCTGTTTTGGCTCCATTACCCATTGGGTTCGCCGTGTTTATGGTACACTTGGCTACCATTCCGATCACCGGAACTGGAATCAACCCCGCTCGGAGTTTCGGTGCCGCTGTTATCTTCAACAGCGAAAAAGCATGGGATGAGCAGTGGATCTTCTGGGTCGGGCCGTTCGTCGGAGCACTGGCGGCAGCGGCATACCACCAGTACATTCTGAGAGCGGCAGCCATTAAAGCTTTGGGATCATTCCGCAGCAACCCTACCAACTAA 912 52.41 MTKDVLEEGRGNKDYVDPPPAPLIDLGELKQWSFYRALIAEFIATLLFLYVTVATVIGNNKQVGDCNGVGLLGIAWAFGGMIFILVYCTAGISGKFHSYSLRFSLNPRHSYDFLFGFAGGHINPAVTFGLFLARKVSLIRAFAYMMAQCLGAIVGVGLVKAFMKHDYNNNGGGANVVSGGYTKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSEKAWDEQWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNPTN 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 19294203 19295190 - Bda013015.1 Bda15g01030 22725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g01030 303 Pfam Major intrinsic protein 112 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda15g01030 303 Pfam Major intrinsic protein 28 94 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda15g01030 303 ProSitePatterns MIP family signature. 121 129 IPR022357 -
Bda15g01030 303 PRINTS Major intrinsic protein family signature 103 127 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda15g01030 303 PRINTS Major intrinsic protein family signature 225 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda15g01030 303 PRINTS Major intrinsic protein family signature 140 159 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda15g01030 303 PRINTS Major intrinsic protein family signature 265 285 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda15g01030 303 PRINTS Major intrinsic protein family signature 36 55 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda15g01030 303 PRINTS Major intrinsic protein family signature 189 207 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda15g01030 303 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 116 302 IPR034294 -
Bda15g01030 303 CDD MIP 36 285 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bda15g01030 303 Gene3D Glycerol uptake facilitator protein. 112 303 IPR023271 -
Bda15g01030 303 Gene3D Glycerol uptake facilitator protein. 21 98 IPR023271 -
Bda15g01030 303 PANTHER BNAC03G65520D PROTEIN 116 302 - -
Bda15g01030 303 SUPERFAMILY Aquaporin-like 34 286 IPR023271 -
Bda15g01030 303 PANTHER BNAC03G65520D PROTEIN 1 101 - -
Bda15g01030 303 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 101 IPR034294 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda08g00987 Bda15g01030 CCT
Bda14g00620 Bda15g01030 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00760 Bda-Chr2:48365973 Bda15g01030 Bda-Chr15:19294203 1.40E-151 dispersed
Bda03g00743 Bda-Chr3:6309940 Bda15g01030 Bda-Chr15:19294203 8.83E-147 dispersed
Bda09g01459 Bda-Chr9:46436180 Bda15g01030 Bda-Chr15:19294203 2.40E-153 dispersed
Bda15g00387 Bda-Chr15:6795935 Bda15g01030 Bda-Chr15:19294203 1.00E-150 dispersed
Bda15g01016 Bda-Chr15:18987039 Bda15g01030 Bda-Chr15:19294203 0 transposed
Bda14g00620 Bda-Chr14:4659157 Bda15g01030 Bda-Chr15:19294203 2.85E-141 wgd
Bda15g01030 Bda-Chr15:19294203 Bda08g00987 Bda-Chr8:19958937 2.56E-146 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g01030 K09872 - tcc:18607531 485.337