Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda15g01063 ATGACATTGGAGAAGATGGAAGGAACAAATGCCCGAGAAGAGAAGATTCTTGTTTTAGTGAGGTTGAGGCCATTGAGTGAGAAAGAGAATCTCATACATGAAGTATCAGATTGGGAATGCATTAATGATTCTACAATCTTGTATCAGAATACACTGCGAGAGGGCTCGTCGTTTCCAAATGTCTATACTTTTGATAGAGTGTTCAGGGATGACTGTTGTACGAAACAAGTGTATGAGGAAGGAGCCAAAGAAATTGCTCTTTCTGTTGTTACTGGTGTCAACTCTAGCATTTTTGCTTATGGGCAAACATGCAGCGGGAAGACCTACACTATGAATGGAATTACTGAATATACAATAGCTGATAAATTTGACTATATAAGAAAGCATGAAGAAAGAGCATTTGTTTTGAAGTTCTCAGTAATTGAGATATACAATGAAGCTGTTAGAGATCTTTTAAGTACTGATAATACTCCACTTAAGCTGCGTGACGATCCTGATCGAGGAACTATTGTGGAAAGAGCAACTGAGGAAACTTTGAGGGATTGGAACCATTTGAAAGAGCTTCTCTCTATTTGTGAAGCTCAAAGACGGATTGGGGAGACCACATTGAATGAGAAAAGCTCCAGATCTCACCAACTTATTAGATTGACAATTGAAAGTTCTGCTCGAGAATTTTTGGGAAAAGATAATTCGACCACTCTTGCTGCTAGCGTGACTTTTGTTGATTTGGCTGGTAGTGAGCGTGCATCTGAGGCATTATCAGCTGGTGCAAGATTGAAAGAAGGGTGCCACATAAATCGCAGTTTACTTACTCTGGGCACTGTTATTCGCAAACTAAGTAAGGGAAGGCAGGGGCACATCAATTATAGAGATTCTAAATTGACACGCATACTGCAGCCATGCTTAGATGGCAATGCCAGAACAGCTATTATCTGCACTTTAAGCCCTGCTAGAAGCCATGTTGAACAAACCAGAAATACTCTTCTATTTGCATGTTGCGCAAAAGAAGTGACTACTAGAGCTCAAGTCAATGTAGTTATGTCTGATAAGGCATTGATTAAGCATTTGCAGAGAGAACTTGCCAGATTGGAGTGTGAGTTGAAAACTCCTGTCCTTATACAATCAAATAGTGACCATACAGCCTTGCTTAGAAAGAAAGATCTGCAGATTGAAAAGATGGAAAAGGAGATTAGAAAGCTTACTAAACAACGGGATCTTGCTCAGTCTCGGGTGGAGGATTTACTTCAAATGGTTAGATGTGATCATGACTCAAGTCATGTATTCTCATTTCCGCTATCGTCTTGTGCTTTATATTGTTGTCATCGCTTGTTGATGCAGAGGGTGGAGGTAGAGCTAGAAAGTGGTAAATTATTAAAGAATGGGAAAGGATATGGAATTGATTTGATACGGAATGAATTGGAAACACGTCCAGATTGGCCAGACGAGTATGAGCAGCAGCAGAGAATGATTTGTGAGCTGTGGCAAACTTGCAACGTGTCATTAGTCCACAGGACTTATTTTTTCCTACTTGTTAATGGTGATCAAACAGATTCCATCTATCTGGAGATGGAGATGAGAAGATTGACTTCTCTGAAAGAAAATTTTTTGCATGGAAATCAGATTGTGGAAGATGGTTGTGGCCAGACTCAAACTCTGGCTGCAAGCGCTAAGGATCTTTGTTGTGAGAGGGAAATGCTGAATAAGCTGATGAAAAAAAGGTTCTCAGAAGAAGAGAGAAAGAGACTTTTCCAGAAGTGGGGTATTTCATTGAACTCAAAACGCAGGAGGCTACAGCTAGCCAACTGCCTGTGGAACAACTCTAAAGATATGAACCACATCACTGAGAGTGCTGCCATTGTTGCAAAGCTTGTCAGATTTGGTGAGCAGGGACAGGCTCTCAAGGGGATGTTTGGCCTTAGCTTCCCACCTCCACGCATAAAGTGGAGAGCCTGGCATCTTTTCTGTTACCTTCTTTAG 1977 40.97 MTLEKMEGTNAREEKILVLVRLRPLSEKENLIHEVSDWECINDSTILYQNTLREGSSFPNVYTFDRVFRDDCCTKQVYEEGAKEIALSVVTGVNSSIFAYGQTCSGKTYTMNGITEYTIADKFDYIRKHEERAFVLKFSVIEIYNEAVRDLLSTDNTPLKLRDDPDRGTIVERATEETLRDWNHLKELLSICEAQRRIGETTLNEKSSRSHQLIRLTIESSAREFLGKDNSTTLAASVTFVDLAGSERASEALSAGARLKEGCHINRSLLTLGTVIRKLSKGRQGHINYRDSKLTRILQPCLDGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTRAQVNVVMSDKALIKHLQRELARLECELKTPVLIQSNSDHTALLRKKDLQIEKMEKEIRKLTKQRDLAQSRVEDLLQMVRCDHDSSHVFSFPLSSCALYCCHRLLMQRVEVELESGKLLKNGKGYGIDLIRNELETRPDWPDEYEQQQRMICELWQTCNVSLVHRTYFFLLVNGDQTDSIYLEMEMRRLTSLKENFLHGNQIVEDGCGQTQTLAASAKDLCCEREMLNKLMKKRFSEEERKRLFQKWGISLNSKRRRLQLANCLWNNSKDMNHITESAAIVAKLVRFGEQGQALKGMFGLSFPPPRIKWRAWHLFCYLL 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 19766821 19772816 - Bda013056.2 Bda15g01063 22758

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda15g01063 658 PANTHER KINESIN-LIKE PROTEIN KIN-7F 4 426 - -
Bda15g01063 658 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 368 IPR027417 -
Bda15g01063 658 ProSiteProfiles Kinesin motor domain profile. 15 337 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda15g01063 658 PANTHER KINESIN-LIKE PROTEIN KIN-7F 454 652 - -
Bda15g01063 658 PRINTS Kinesin heavy chain signature 201 218 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda15g01063 658 PRINTS Kinesin heavy chain signature 237 255 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda15g01063 658 PRINTS Kinesin heavy chain signature 287 308 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda15g01063 658 PRINTS Kinesin heavy chain signature 92 113 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda15g01063 658 SMART kinesin_4 13 345 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda15g01063 658 Coils Coil 346 366 - -
Bda15g01063 658 Pfam Domain of unknown function (DUF3490) 482 643 IPR021881 -
Bda15g01063 658 Pfam Kinesin motor domain 21 337 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bda15g01063 658 CDD KISc_CENP_E 15 337 - -
Bda15g01063 658 Coils Coil 383 417 - -
Bda15g01063 658 ProSitePatterns Kinesin motor domain signature. 236 247 IPR019821 GO:0003777|GO:0005524|GO:0007018
Bda15g01063 658 PANTHER CENTROMERE PROTEIN E 4 426 - -
Bda15g01063 658 Gene3D Kinesin motor domain 6 367 IPR036961 -
Bda15g01063 658 PANTHER CENTROMERE PROTEIN E 454 652 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda15g01063 K11498 CENPE; centromeric protein E - mnt:21387979 704.516
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bda08g00962 Bda15g01063 CCT
Bda08g00962 Bda15g01063 ECH
Bda14g00581 Bda15g01063 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda15g01063 Bda-Chr15:19766821 Bda15g01073 Bda-Chr15:19967430 2.18E-74 dispersed
Bda15g01063 Bda-Chr15:19766821 Bda15g01064 Bda-Chr15:19807233 0 tandem
Bda14g00581 Bda-Chr14:4445971 Bda15g01063 Bda-Chr15:19766821 2.87E-90 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g46 Blo02g00649 . . Bda08g00962 . Bpe12g00095 . . Cmo19g00704 . . . . . . Cpe04g00100 Cpe15g00563 Bhi05g01255 . . . . . . Cla02g00484 Cam02g0492 Cec02g0493 Cco02g0498 Clacu02g0496 Cmu02g0491 Cre02g0824 Cone12ag1189 Cone8ag1236 . Cone10ag1095 . Csa07g00039 . Cme01g01338 Blo04g00541 Blo13g00533 Bda15g01063 Bda14g00581 Bpe15g00840 Bpe05g00313 Bma03g00574 . . . . . Cma19g00692 . Car19g00536 . . . . . . . . . . . . . . . . Lsi11g01139 . Chy01g00742 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0024481 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda15g01063 Bda_Chr15 FPKM 25.099028 25.686172 29.542816 28.657627 23.372822 24.668646 24.837246 24.155134 21.742527