Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00028 ATGGAAGAAGTGAAACTCCATGGGATGTGGGCAAGTCCTTTTAGTTATAGGGTTAAATGGGGTTTGGAGCTTAAGGGCATTCCTTACGAATATGTAGAAGAAGATTTTACCAACAAAACTCCATTGTTACTTCAATATAATCCTATTCACAAGAAGGTTCCTGTGCTCGTTCATGGCGGAAAACCAGTGTGCGAGTCTATCGTCATTCTCGAATACATGGATGAAATATGGTCTCAATATCCTCTCTTTCTCATCCATTCGTTCGACAGAGCAATGACTCGCTTTTGGATTAAATATGCTGACAACGAGTTGTTTGGAGGTCGGATTCTGTTCGGTTCCGGTAGTGGCGAAGAAGAGGAAAAAGCTAGGGCGGAGGGGATCGAATTCCTGAAAACAATCGAAGAACAATGCCTTGGCGACAAGAAATTCTTCGCCGGAGAGGAGATCGGCGCCCTGGATTTGGCGTTCGCAGGAATCGCGCACTGGCTACCAGTTGTTGAAGAAGTTTCAGGGACGAAGCTTCTGAACGCCGATGAATTCCCTCGCTTGTACGCTTGGACACAAAACTTGAAGCACGTTACTGTGATCAGAAATAACCTGCCGGACGCCGACAAGTTGGCCGGACTTTACAACCGCCTGCGCGACCAGCGGTTGCGATCTGTGGCAGAGTAAACGGTTTTGAAGGATGTGTGATGTGATTTGTTTCTTAATTCTATTTTAAAGAAATATCGATATAACTACAAAAATAAAAATAAAAAA 759 44.27 MEEVKLHGMWASPFSYRVKWGLELKGIPYEYVEEDFTNKTPLLLQYNPIHKKVPVLVHGGKPVCESIVILEYMDEIWSQYPLFLIHSFDRAMTRFWIKYADNELFGGRILFGSGSGEEEEKARAEGIEFLKTIEEQCLGDKKFFAGEEIGALDLAFAGIAHWLPVVEEVSGTKLLNADEFPRLYAWTQNLKHVTVIRNNLPDADKLAGLYNRLRDQRLRSVAE 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 297668 298897 + XM_039021875.1 Bhi01g00028 22801

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00028 223 CDD GST_N_Tau 4 77 - -
Bhi01g00028 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 223 IPR010987 -
Bhi01g00028 223 Gene3D - 86 221 - -
Bhi01g00028 223 Pfam Glutathione S-transferase, C-terminal domain 118 190 IPR004046 -
Bhi01g00028 223 PANTHER GLUTATHIONE S-TRANSFERASE 1 215 - -
Bhi01g00028 223 SUPERFAMILY GST C-terminal domain-like 75 215 IPR036282 -
Bhi01g00028 223 CDD GST_C_Tau 88 206 IPR045074 GO:0004364|GO:0006749
Bhi01g00028 223 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Bhi01g00028 223 SUPERFAMILY Thioredoxin-like 1 82 IPR036249 -
Bhi01g00028 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Bhi01g00028 223 Gene3D Glutaredoxin 1 84 - -
Bhi01g00028 223 SFLD Glutathione Transferase (cytosolic) 1 217 IPR040079 -
Bhi01g00028 223 SFLD Main.3: Omega- and Tau-like 1 217 IPR045073 -
Bhi01g00028 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 215 IPR045073 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00028 K00799 GST, gst; glutathione S-transferase [EC:2.5.1.18] - csv:101220801 384.03
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00028 Bhi-Chr1:297668 Bhi01g00031 Bhi-Chr1:371652 5.44E-87 dispersed
Bhi08g01175 Bhi-Chr8:36822052 Bhi01g00028 Bhi-Chr1:297668 1.83E-53 dispersed
Bhi01g00028 Bhi-Chr1:297668 Bhi01g00030 Bhi-Chr1:366375 9.14E-89 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g826 . . . . . . . . . . . Cma14g01862 . . . Cpe08g00370 Cpe03g01560 Bhi01g00028 . . . . . . . . . . . . . . . . . Lsi05g01794 . . Cme06g00428 . . . . . . . . . Cmo06g01285 . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000433 1 5 2 3 1 5 3 5 5 4 2 4 4 7 7 4 4 1 5 4 3 3 3 5 6 6 2 5 5 6 120
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi01g00028 Bhi_Chr01 FPKM 4.695257 4.62957 1.461458 2.237791 20.032642 21.881073 17.901978 1.086602 1.228125 0.852663