Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00039 CGGCGTCCTTTCTCTCTCTCCATTTCTCCTATAAATGAGGAGTAATGGGAGAACTGAACTGTCAGTCCTTTCGTCTTCCTCCTTCCTCTGAACTCCAAACCAATGGATTCAGGGTTCTGCACCGCCCATCTCTCTCAGCTTCTCGGCCCCAACACCACCAACGCCACCGCCGCTGCTAATTTCATCTGCGATCAATTCACCACCGTCACCACCAACTTCTCCGACACCAAAAATGCCCTCGACAACACATACCTTCTCTTCTCCGCCTACCTCGTCTTCTCTATGCAACTCGGCTTCGCCATGCTCTGCGCCGGTTCCGTCCGCGCCAAAAACACCATGAACATCATGCTCACCAACGTCCTCGACGCCGCTGCCGGCGGCCTCTTCTATTACCTTTTTGGCTACGCTTTCGCCTTCGGCTCCCCTTCCAATGGCTTCATCGGCCGCCATAACTTCGGTCTCACCTCCTTCCCTACCTCCACTGCCGATTACAGTGTTTTCCTCTACCAGTGGGCGTTTGCCATCGCTGCCGCCGGGATTACAAGTGGATCTATCGCTGAGCGGACTCAGTTCGTCGCTTATTTGATTTATTCCTCTGTTTTGACTGGATTCGTTTATCCGGTGGTTTCTCACTGGTTTTGGTCGCCCGATGGTTGGGCTGGGGTTATGAGATCGGATGGGGGATTGTTGTTCGGATCGGGAGTTATCGATTTCGCCGGCTCCGGAGTCGTTCATATGGTTGGGGGAATTGCTGGTCTATGGGGCGCGTTGATCGAGGGGCCGAGAATCGGTCGATTCGATCACAACGGCCGGTCGGCGGCTCTGCGAGGACACAGCGCTTCGTTAGTCGTTCTCGGAACTTTCATGCTCTGGTTCGGATGGTACGGTTTCAATCCAGGTTCGTTCACGAAGATTCTCGTCCCTTATACCTCCGGAAACTTCTACGGCCAGTGGAGCGCCGTCGGACGAACAGCGGTTACCACCACGCTCGCCGGATGCACGGCGGCACTCACCACGCTTTTCGGGAAGCGATTCCTCTCGGGCCATTGGAACGTGACGGACGTTTGTAACGGACTCCTTGGCGGCTTCGCCGCCATCACCGCCGGCTGCTCCGTCGTCGAGCCATGGGCAGCAATCATCTGCGGCTTCGTCGCCGCCCTTGTGCTAATAACCTGCAACCGCATCGCAGAGAAGGTGAAATACGACGATCCATTAGAAGCCGCTCAACTCCACGGCGGGTGCGGCGCGTGGGGAGTGATATTCACGGCACTCTTCGCAACGAAGGAGTACGTAACGGAAGTGTACGGTGGAACGGGGCGTCCGTACGGCCTTCTGATGGGCGGCGGCGGGAGGTTACTGGCAGCGCATTTGATACAGATTTTGGTGATTGTGGGGTGGGTGAGCGCAACGATGGGGCCATTGTTCTTTGTTCTTCATAAATTGAAGCTTCTGAGAATCTCCAGTGAAGATGAAATGGCGGGGATGGATCTGACCCGCCATGGGGGATTTGCTTACATATATCATGATGAAGATGAAGCCAAGAAAATGGGGATTCAGTTGAACAGAGTGGAACCAAAATCTGCAACTCCTACTGGAGATTTTTTATGATGATGAACAATTAAGGTTGTTGTTTTTGCGACTATTGCTTAAGTTTCTCTAATGGTTTTAGTGTTAGTTTGTTGGATTTTGCTTCAAAATTTGTTTGATTGTGTGTCAATTAATGTTCTAGTCTGTGGATATGGTGAACAGATAACCCAAACACTATAGAATTTGTGTTTTCTCTGCTTTCTTTATTA 1796 52.23 MDSGFCTAHLSQLLGPNTTNATAAANFICDQFTTVTTNFSDTKNALDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAFGSPSNGFIGRHNFGLTSFPTSTADYSVFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSVLTGFVYPVVSHWFWSPDGWAGVMRSDGGLLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHNGRSAALRGHSASLVVLGTFMLWFGWYGFNPGSFTKILVPYTSGNFYGQWSAVGRTAVTTTLAGCTAALTTLFGKRFLSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIICGFVAALVLITCNRIAEKVKYDDPLEAAQLHGGCGAWGVIFTALFATKEYVTEVYGGTGRPYGLLMGGGGRLLAAHLIQILVIVGWVSATMGPLFFVLHKLKLLRISSEDEMAGMDLTRHGGFAYIYHDEDEAKKMGIQLNRVEPKSATPTGDFL 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 740159 741954 - XM_039020654.1 Bhi01g00039 22812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00039 501 TIGRFAM amt: ammonium transporter 47 471 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bhi01g00039 501 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 1 6 494 - -
Bhi01g00039 501 Pfam Ammonium Transporter Family 50 471 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bhi01g00039 501 SUPERFAMILY Ammonium transporter 44 452 - -
Bhi01g00039 501 PANTHER AMMONIUM TRANSPORTER 6 494 - -
Bhi01g00039 501 Gene3D Ammonium transporter AmtB like domains 25 490 IPR029020 -
Bhi01g00039 501 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00039 Bhi-Chr1:740159 Bhi06g01050 Bhi-Chr6:29000896 0 dispersed
Bhi01g00039 Bhi-Chr1:740159 Bhi12g01550 Bhi-Chr12:50387940 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00039 K03320 - csv:101208366 907.516