Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00104 ATGGCGGGCTTAGACTTAGGCTCTGCTTCTCACTTTGTTCATCAACTTCAGCACCGTTCCGTGGATCTACACCTGCAGCATCCGACGGATGTAGACGACGGTTCCGACCACCAACCCAACTCCGGCGGCGAGATCGTCGCCCGGCGGTCCAGAGGCAGACCGTCCGGTTCTAAAAATAAACCGAAGCCACCGGTTATTATTACCAGAGAAAGTGCTAATACTCTTCGGGCCCACATCTTGGAAGTCAACACCGGTTGCGATGTCTTCGACTCCGTCGCCACTTATGCCCGGAAGCGCCAGCGTGGCATCTGCATCTTGAGTGGCACCGGCACCGTCACCAACGTTACCTTACGGCAACCTGCATCGGCCGGCGCAGTTGTCACTCTTCCTGGCAGGTTTGAGATATTGTCTTTATCGGGATCGTTCTTGCCGCCACCGGCTCCACCAGGAGCTACGAGTTTGACTATCTTCCTTGCGGGCGGGCAAGGACAAATTCTCGGAGGGAATGTAGTTGGGTCTTTGATTGCTTCTGGACCGGTGATCGTCATTGCGTCGTCGTTTACCAATGTTGCTTACGAGAGGCTACCGTTGGACGAGGAGGAACAACCGTCCAACGGTGGTGGTGCGAGCCTTAGCAACCCGTTTCCGGACCCGTCGGTCGGGTTTCCATTGTTTAATCTGCCGTCGAACATGGCGGGGAATCAAAATCAGCTACCGGTGGACGGATGGGGTGGAGGGAACTCCGGTGGGAGAGCATCTTATTGA 765 55.69 MAGLDLGSASHFVHQLQHRSVDLHLQHPTDVDDGSDHQPNSGGEIVARRSRGRPSGSKNKPKPPVIITRESANTLRAHILEVNTGCDVFDSVATYARKRQRGICILSGTGTVTNVTLRQPASAGAVVTLPGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQILGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEEQPSNGGGASLSNPFPDPSVGFPLFNLPSNMAGNQNQLPVDGWGGGNSGGRASY 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2168956 2169885 + XM_039020693.1 Bhi01g00104 22877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00104 254 Gene3D - 75 203 - -
Bhi01g00104 254 Pfam Plants and Prokaryotes Conserved (PCC) domain 76 189 IPR005175 -
Bhi01g00104 254 ProSiteProfiles PPC domain profile profile. 72 214 IPR005175 -
Bhi01g00104 254 MobiDBLite consensus disorder prediction 26 65 - -
Bhi01g00104 254 SUPERFAMILY AF0104/ALDC/Ptd012-like 72 201 - -
Bhi01g00104 254 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 254 IPR014476 GO:0003680
Bhi01g00104 254 CDD DUF296 76 185 IPR005175 -
Bhi01g00104 254 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 254 - -
Bhi01g00104 254 MobiDBLite consensus disorder prediction 232 254 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00273 Bhi-Chr1:5186743 Bhi01g00104 Bhi-Chr1:2168956 2.93E-73 transposed
Bhi02g00127 Bhi-Chr2:2419074 Bhi01g00104 Bhi-Chr1:2168956 1.87E-75 transposed
Bhi02g01453 Bhi-Chr2:39298549 Bhi01g00104 Bhi-Chr1:2168956 4.59E-43 transposed
Bhi04g00924 Bhi-Chr4:23669358 Bhi01g00104 Bhi-Chr1:2168956 1.87E-50 transposed
Bhi04g02379 Bhi-Chr4:65118437 Bhi01g00104 Bhi-Chr1:2168956 5.58E-60 transposed
Bhi05g00551 Bhi-Chr5:13546805 Bhi01g00104 Bhi-Chr1:2168956 2.23E-110 transposed
Bhi06g00976 Bhi-Chr6:26791656 Bhi01g00104 Bhi-Chr1:2168956 3.43E-74 transposed
Bhi06g01828 Bhi-Chr6:51245070 Bhi01g00104 Bhi-Chr1:2168956 2.71E-81 transposed
Bhi09g02495 Bhi-Chr9:67484446 Bhi01g00104 Bhi-Chr1:2168956 8.65E-43 transposed
Bhi11g00146 Bhi-Chr11:3366473 Bhi01g00104 Bhi-Chr1:2168956 1.54E-104 transposed
Bhi12g00359 Bhi-Chr12:11385206 Bhi01g00104 Bhi-Chr1:2168956 1.68E-87 transposed
Bhi12g01646 Bhi-Chr12:53155832 Bhi01g00104 Bhi-Chr1:2168956 9.16E-70 transposed
Bhi12g02623 Bhi-Chr12:81027000 Bhi01g00104 Bhi-Chr1:2168956 6.15E-81 transposed
Bhi01g00104 Bhi-Chr1:2168956 Bhi12g02568 Bhi-Chr12:79549718 3.32E-100 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00104 - - csv:101220959 456.832