Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00234 TCAATTCTGAGTTCGTTGTTCCTCCATTAATGGCGGTTTAAAGCTCCAAAATTTCACGTGGGTCATTGCCCTCCAATAAAACAATTTTGAAATATTGTTCTAAAAGCTTTTTTAAAAAATCGAGTTCTTCAAATTCACTTTTTTTGCTTAGAAATTTGTTTATAAGATTTTAAGAATTTTCAAATGAGAAAAAAAAAGGTTTAAAAATCAATCACATGGCAAGTAGACTGCAGGTTGCCTTTCTGATTTAGCCTTTTACCCACGCTCATTACAGACTCATACTGACAAAGACAGAAGAAAGAGAAAAAAATAAAAAAGGAAAAAAAAATTGGGACAGAGACACTACGCAGAAACATCGCTGTCTAATTTCTCACTATTTTTTTTTAATTAATTTGATTTTTTTTTCTTTTTTCTGCGAATTATTTCTTGATTGCTTGACCCATTTTCGGGGCTCCGACCCAAAAGGGTAGTTTAAGTTAATTGAGTGAATTTTTTGTTTGTTCCTTTTGTTCTCACATTTTTTCGTTTTGTTATTTGATTTTTTTTCCCACTCGCCGGAGCAAAAATGCTCTCTGGGTTTTCACAGGAACCGGCCGGAATGTACTCCGCCATTCCGGCGCTGCCGATGGACGGCGGCGGTGGTAAGTTTCAGGGTTCTTTAGATGGAACGAATCTTCCTGGCGACGCTTGTTTGGTTCTCACGTCGGATCCGAAGCCGCGCCTCCGCTGGACGGCGGAGCTCCATGAACGATTCGTTGACGCCGTCACTCAGCTCGGCGGCCCCGACAAGGCAACTCCAAAAACAATTATGAGAACAATGGGAGTAAAAGGTCTCACCCTTTATCACTTAAAATCACACCTCCAGAAATATCGGCTTGGGAAGCAATCGTTCAAGGAATCGACTGAGAACTCAAAGGATGCTTCTTGCATTGCAGAAAGTCAAGAAACAAGTTCCTCTTCGTCGCCATCGTCGAGAATAATGACACAGGACCTGAATGACGGTTTCCAAGTCACAGAGGCTTTACGAGTGCAAATGGAGGTTCAAAGAAGGCTGCACGAGCAGCTGGAGGTGCAGCGTCATCTTCAACTTCGCATTGAAGCACAAGGAAAATACTTGCAGTCGATACTCGAGCGGGCTTGTCAAGCATTAAGTGATCAGGCTGCAGCGTCTGCCGGACTCGAAGCTGCCAGAGAAGAGCTCTCTGAACTTGCAATCAAAGTCTCCAATGACTCTAAAGAGATGGCACCATTGGAGACTCAAAAAGTGCTTCCTTTTTCAGAACTTGCTGCTGCTCTAGAAAATCGAAAGGCTCCTACCGTTATGCCTCGGATAGGCGATTGCTCAATGGATAGCTGCCTGACATCAGCTGGAAGCCCGGTTTCGCCGATTGGAGTAGGATCAACTGCCACCGCAATGAAGAGACCGAGACCAGTATTTAGTCACGGAGATTCAATGGCTCTCGAGGGCAATGCCCGGCACGATGTCGAATGGATGATGAGTAATATTGGATGAAACATAGGACTCTCTTTCTAAAAGTCCAGCCTTTTCTTCTGATCTATTTGCTCACTTCTTTTTTCTTTTTCTTTTTTCTAGCTCATCCAAATGTGTTTACATCTTTAACGAAGTATTATACAATCTATTTTCTGGTTTGTATATTCTTTATAATCAGACCCCTCTGATCTGCATTAGAGATTGATCTTCTTTTGCTTTTGGAAATGTGAAAGTTTCCATATGAATGTTCCCTTTGTACAATCAAATCACAAAAGAAACAAAGTGCTATTGACCAACTTTTGAGATGATGCCAAAA 1808 41.7 MLSGFSQEPAGMYSAIPALPMDGGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDASCIAESQETSSSSSPSSRIMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEAQGKYLQSILERACQALSDQAAASAGLEAAREELSELAIKVSNDSKEMAPLETQKVLPFSELAAALENRKAPTVMPRIGDCSMDSCLTSAGSPVSPIGVGSTATAMKRPRPVFSHGDSMALEGNARHDVEWMMSNIG 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4370350 4374913 - XM_039022115.1 Bhi01g00234 23007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00234 315 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 50 105 IPR006447 GO:0003677
Bhi01g00234 315 SUPERFAMILY Homeodomain-like 50 107 IPR009057 -
Bhi01g00234 315 Coils Coil 205 225 - -
Bhi01g00234 315 Pfam MYB-CC type transfactor, LHEQLE motif 148 193 IPR025756 -
Bhi01g00234 315 MobiDBLite consensus disorder prediction 114 139 - -
Bhi01g00234 315 Gene3D - 49 108 - -
Bhi01g00234 315 MobiDBLite consensus disorder prediction 113 139 - -
Bhi01g00234 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 47 107 IPR017930 -
Bhi01g00234 315 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 312 IPR044848 GO:0003700
Bhi01g00234 315 Pfam Myb-like DNA-binding domain 53 103 IPR001005 -
Bhi01g00234 315 PANTHER PROTEIN PHR1-LIKE 2 12 312 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00234 Bhi-Chr1:4370350 Bhi05g01981 Bhi-Chr5:61216090 3.71E-74 dispersed
Bhi01g00234 Bhi-Chr1:4370350 Bhi01g00235 Bhi-Chr1:4370350 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
7 PF00249 Myb_DNA-binding 1.90E-07 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00234 - - csv:101213244 560.066