Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00235 AACAATCAATTCTGAGTTCGTTGTTCCTCCATTAATGGCGGTTTAAAGCTCCAAAATTTCACGTGGGTCATTGCCCTCCAATAAAACAATTTTGAAATATTGTTCTAAAAGCTTTTTTAAAAAATCGAGTTCTTCAAATTCACTTTTTTTGCTTAGAAATTTGTTTATAAGATTTTAAGAATTTTCAAATGAGAAAAAAAAAGGTTTAAAAATCAATCACATGGCAAGTAGACTGCAGGTTGCCTTTCTGATTTAGCCTTTTACCCACGCTCATTACAGACTCATACTGACAAAGACAGAAGAAAGAGAAAAAAATAAAAAAGGAAAAAAAAATTGGGACAGAGACACTACGCAGAAACATCGCTGTCTAATTTCTCACTATTTTTTTTTAATTAATTTGATTTTTTTTTCTTTTTTCTGCGAATTATTTCTTGATTGCTTGACCCATTTTCGGGGCTCCGACCCAAAAGGGTAGTTTAAGTTAATTGAGTGAATTTTTTGTTTGTTCCTTTTGTTCTCACATTTTTTCGTTTTGTTATTTGATTTTTTTTCCCACTCGCCGGAGCAAAAATGCTCTCTGGGTTTTCACAGGAACCGGCCGGAATGTACTCCGCCATTCCGGCGCTGCCGATGGACGGCGGCGGTGGTAAGTTTCAGGGTTCTTTAGATGGAACGAATCTTCCTGGCGACGCTTGTTTGGTTCTCACGTCGGATCCGAAGCCGCGCCTCCGCTGGACGGCGGAGCTCCATGAACGATTCGTTGACGCCGTCACTCAGCTCGGCGGCCCCGACAAGGCAACTCCAAAAACAATTATGAGAACAATGGGAGTAAAAGGTCTCACCCTTTATCACTTAAAATCACACCTCCAGAAATATCGGCTTGGGAAGCAATCGTTCAAGGAATCGACTGAGAACTCAAAGGATGAAAGTCAAGAAACAAGTTCCTCTTCGTCGCCATCGTCGAGAATAATGACACAGGACCTGAATGACGGTTTCCAAGTCACAGAGGCTTTACGAGTGCAAATGGAGGTTCAAAGAAGGCTGCACGAGCAGCTGGAGGTGCAGCGTCATCTTCAACTTCGCATTGAAGCACAAGGAAAATACTTGCAGTCGATACTCGAGCGGGCTTGTCAAGCATTAAGTGATCAGGCTGCAGCGTCTGCCGGACTCGAAGCTGCCAGAGAAGAGCTCTCTGAACTTGCAATCAAAGTCTCCAATGACTCTAAAGAGATGGCACCATTGGAGACTCAAAAAGTGCTTCCTTTTTCAGAACTTGCTGCTGCTCTAGAAAATCGAAAGGCTCCTACCGTTATGCCTCGGATAGGCGATTGCTCAATGGATAGCTGCCTGACATCAGCTGGAAGCCCGGTTTCGCCGATTGGAGTAGGATCAACTGCCACCGCAATGAAGAGACCGAGACCAGTATTTAGTCACGGAGATTCAATGGCTCTCGAGGGCAATGCCCGGCACGATGTCGAATGGATGATGAGTAATATTGGATGAAACATAGGACTCTCTTTCTAAAAGTCCAGCCTTTTCTTCTGATCTATTTGCTCACTTCTTTTTTCTTTTTCTTTTTTCTAGCTCATCCAAATGTGTTTACATCTTTAACGAAGTATTATACAATCTATTTTCTGGTTTGTATATTCTTTATAATCAGACCCCTCTGATCTGCATTAGAGATTGATCTTCTTTTGCTTTTGGAAATGTGAAAGTTTCCATATGAATGTTCCCTTTGTACAATCAAATCACAAAAGAAACAAAGTGCTATTGACCAACTTTTGAGATGATGCCAAAA 1798 41.6 MLSGFSQEPAGMYSAIPALPMDGGGGKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSFKESTENSKDESQETSSSSSPSSRIMTQDLNDGFQVTEALRVQMEVQRRLHEQLEVQRHLQLRIEAQGKYLQSILERACQALSDQAAASAGLEAAREELSELAIKVSNDSKEMAPLETQKVLPFSELAAALENRKAPTVMPRIGDCSMDSCLTSAGSPVSPIGVGSTATAMKRPRPVFSHGDSMALEGNARHDVEWMMSNIG 310
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4370350 4374918 - XM_039022116.1 Bhi01g00235 23008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00235 310 MobiDBLite consensus disorder prediction 108 135 - -
Bhi01g00235 310 Coils Coil 200 220 - -
Bhi01g00235 310 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 307 IPR044848 GO:0003700
Bhi01g00235 310 Pfam Myb-like DNA-binding domain 53 103 IPR001005 -
Bhi01g00235 310 SUPERFAMILY Homeodomain-like 50 107 IPR009057 -
Bhi01g00235 310 Pfam MYB-CC type transfactor, LHEQLE motif 143 188 IPR025756 -
Bhi01g00235 310 PANTHER PROTEIN PHR1-LIKE 2 12 307 - -
Bhi01g00235 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 47 107 IPR017930 -
Bhi01g00235 310 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 50 105 IPR006447 GO:0003677
Bhi01g00235 310 MobiDBLite consensus disorder prediction 119 135 - -
Bhi01g00235 310 Gene3D - 49 108 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00235 Bhi-Chr1:4370350 Bhi05g01981 Bhi-Chr5:61216090 2.34E-74 dispersed
Bhi03g00734 Bhi-Chr3:13713006 Bhi01g00235 Bhi-Chr1:4370350 4.64E-58 dispersed
Bhi05g00013 Bhi-Chr5:339955 Bhi01g00235 Bhi-Chr1:4370350 1.24E-55 dispersed
Bhi05g00014 Bhi-Chr5:340462 Bhi01g00235 Bhi-Chr1:4370350 5.89E-27 dispersed
Bhi01g00234 Bhi-Chr1:4370350 Bhi01g00235 Bhi-Chr1:4370350 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
8 PF00249 Myb_DNA-binding 1.80E-07 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00235 - - csv:101213244 547.354