Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00241 AATTTAAAACTTTCAAGTTCCAAACTTTCACTTTATTATTTATCCCCTCAGGCTCCTCCTCTCTTCTTTCTAATTATTTCTATAAAACCCTCCACCATTTACAAAATTTCCACCTGCCCCCCCTTCTGAATTCCCCACCCACTTTGTTGCCTGGTGGGGGAAAAAAGTTAGGAGGAAAGTGAAAATTGTCTTGAGGTGAAAAAGAGCATAGAAATTGAGTTGGTTCGATTAAAGTTTGGTGTGTTGTATGCATATATGCATATAGTAAACCCAATGGAGAAAGACGATAACTACTCGAACGAAGCTGCTATGCCTCCAAGTTTCTCCAGCCACCAAGATCTCTACAATAACCAAGACCAGTTCATGAGGTCTCGCCCTTTCGAAGCCTCCGCAGACAACACCACCGGAATCCTCACCTACTTTCCGGCTAACCCTCCGCCGCTGCAGCCAATAACCTCTCCGGACAAGCTCAGCTTTGCCGAGGTTATGCAGTTTGCCGACTTCGGTCCGAAGCTCAGTCTCAACCGGTTCGACGATGATGACGAACCGCCAGGTATCGACCCGGTCTATTTCCTGAAGTTCCCGGTTTTAAATAATGAGAGGGCGGAGGAGACGGCGGTAGCTGGAGAGGAGGAAGCGGCGGAGATGGAAGGGAGATTAATTGTAGGGGAATTAGAAGAGGAGGAGAATTTTAGGAATAATAATAATAATAATAATAATAATAATAATAATAATAATGGTAATAAAAGGAAAAGAGGACGGACGGTGAAGACAAGTGAAGAAGTGGAGAGCCAAAGGATGACACATATTGCGGTTGAGAGAAATCGAAGGAAGCAAATGAATGAACATCTTCGAGTTTTGCGCTCTCTCATGCCTGGTTCTTACGTTCAAAGGGGAGATCAAGCTTCCATAATAGGCGGAGCAATCGAGTTCGTAAGAGAGCTAGAGCAACTCCTGCAATGTCTAGAATCCCAAAAACGACGTCGTCTCTTAGGAGAACCACCACTAGTGCAGGCCGCGGACGCACCGCCGCCGCAGCAACCGCCATTTCTGGCACCGGGAGCAGGTAATTTTCCAGGTCATCAAAACGACGGGCAAATATTCGAAACGACAGCGGAAAGCAAATCGTGCCTTGCTGACGTGGAAGTGAAAGTAGTAGGGTTTGACGCTATGATAAAAATCCTGTCAAGAAGACGACCGGGACAGCTCATCAAAGCCATCGCTGCTCTCGAAGATCTTCAACTAAATATTCTTCACACAAATATCACCACCATTGAACAGACTGTTCTTTATTCTTTCAACGTCAAGATAGCAAATGAGTCAAGATTCACAGCTGAAGATATAGCAAGTTCAGTTCAGCAGATATTCGGTTTTATTCATGCGAACACCGGCATGTGATGCAATAAATTGAACTCATACATAATCTCTATATATTTGTATTATTAATATTACTTCACAACTTTCACAAATTTTTTTTTGCTTTTCTCTATTGTTGTTTCATTTTTAGTTATTACTTATATTAATAATATATATATATACTCATGAATTAAAAAA 1554 42.34 MHIVNPMEKDDNYSNEAAMPPSFSSHQDLYNNQDQFMRSRPFEASADNTTGILTYFPANPPPLQPITSPDKLSFAEVMQFADFGPKLSLNRFDDDDEPPGIDPVYFLKFPVLNNERAEETAVAGEEEAAEMEGRLIVGELEEEENFRNNNNNNNNNNNNNNGNKRKRGRTVKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGEPPLVQAADAPPPQQPPFLAPGAGNFPGHQNDGQIFETTAESKSCLADVEVKVVGFDAMIKILSRRRPGQLIKAIAALEDLQLNILHTNITTIEQTVLYSFNVKIANESRFTAEDIASSVQQIFGFIHANTGM 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4540204 4545673 - XM_039031899.1 Bhi01g00241 23014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00241 380 PANTHER TRANSCRIPTION FACTOR FAMA 50 379 - -
Bhi01g00241 380 SMART finulus 185 236 IPR011598 GO:0046983
Bhi01g00241 380 Coils Coil 114 134 - -
Bhi01g00241 380 PANTHER TRANSCRIPTION FACTOR FAMA 50 379 IPR044283 GO:0003700|GO:0010052
Bhi01g00241 380 MobiDBLite consensus disorder prediction 168 182 - -
Bhi01g00241 380 CDD bHLH_AtFAMA_like 182 250 - -
Bhi01g00241 380 Gene3D - 170 245 IPR036638 GO:0046983
Bhi01g00241 380 MobiDBLite consensus disorder prediction 1 21 - -
Bhi01g00241 380 MobiDBLite consensus disorder prediction 147 164 - -
Bhi01g00241 380 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 179 251 IPR036638 GO:0046983
Bhi01g00241 380 MobiDBLite consensus disorder prediction 146 182 - -
Bhi01g00241 380 CDD ACT_UUR-ACR-like 306 370 - -
Bhi01g00241 380 Pfam Helix-loop-helix DNA-binding domain 180 231 IPR011598 GO:0046983
Bhi01g00241 380 ProSiteProfiles ACT domain profile. 306 380 IPR002912 -
Bhi01g00241 380 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 179 230 IPR011598 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00241 Bhi-Chr1:4540204 Bhi01g00857 Bhi-Chr1:16161798 1.51E-55 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
9 PF00010 HLH 7.80E-10 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00241 - - cpep:111790068 583.948