Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00242 GAAGAAAGGGGCAGCCAATTCCTTCTACCTACTCCCAAACCAAACCAAATCCCAATTTCAGTTGACGATCCAGAACTTTCCTTTACCTTAATTACCCAAACCCCCCTTCTTCTTTCTGAATATATTGTCTTTCAGCTGCTTTTTCTTCCTCTTTCATCTTCGTGTTCATCGCCCACTTTCCCCTTTCCTCTGCTTCTCTATCGGATCCAGTCCGACCCACCAATCCAATTCCACGAAATGGGTAGCGGAGAAAAGGTTTTCACTTTGAAGGAAGTCGCTGAGCACAACAATCACAAGGACTGTTGGCTCATTATCAGTGGCAAGGTATATGATGTGACCAAGTTCTTAGAAGACCATCCTGGTGGTGACGATGTTTTGTTATCAGCTACAGGAAAAGACGCAACCGACGACTTTGAAGATGTCGGGCACAGTGACAATGCAAGAGAAATGATGGATCAATACTATGTTGGGGAGATTGATGCTTCAACAATTCCAAAGAAGGTTGCATATACACCTCCAAAACAGCCTCATTACAATCAGGACAAGACATCCGAGTTCATCATCAAGCTTCTTCAATTCCTCGTCCCACTTGCAATTTTGGGGTTGGCTGTCGCCATACGCTTCTACACCAAACAAGCTTGAGCTCTTGAGGTAACCTTAGAGACTTTTAAATTTGTTAGATTGTTGTTAGTCGTCGATTTTTATGCTGTTTCTAATGATCAGATTGTTCAGCAATGTCGTTTCTTGGTTATAAAATGCAGACACAGATGGTGGTTTTCATTTCCAACTTCCTCTAGATTTGTTATATTTAATGTACCTTTATACTTTTTAATTTTCAAAATAAAGATGGTGGAGATTTTGTTATC 866 40.88 MGSGEKVFTLKEVAEHNNHKDCWLIISGKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDVGHSDNAREMMDQYYVGEIDASTIPKKVAYTPPKQPHYNQDKTSEFIIKLLQFLVPLAILGLAVAIRFYTKQA 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4578991 4582438 + XM_039028462.1 Bhi01g00242 23015

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00242 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Bhi01g00242 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Bhi01g00242 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Bhi01g00242 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Bhi01g00242 134 Gene3D - 2 86 IPR036400 -
Bhi01g00242 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Bhi01g00242 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Bhi01g00242 134 PANTHER CYTOCHROME B5 1 132 - -
Bhi01g00242 134 PANTHER CYTOCHROME B5-LIKE 1 132 - -
Bhi01g00242 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 90 IPR036400 -
Bhi01g00242 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Bhi01g00242 134 SMART Cyt_b5_2 8 81 IPR001199 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00242 K23490 CYB5; cytochrome b5 - csv:101214209 275.404
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00242 Bhi-Chr1:4578991 Bhi07g01647 Bhi-Chr7:46389594 5.14E-91 dispersed
Bhi04g01160 Bhi-Chr4:28156959 Bhi01g00242 Bhi-Chr1:4578991 4.65E-35 dispersed
Bhi09g00669 Bhi-Chr9:14434642 Bhi01g00242 Bhi-Chr1:4578991 1.74E-12 dispersed
Bhi09g00670 Bhi-Chr9:14434642 Bhi01g00242 Bhi-Chr1:4578991 1.74E-12 dispersed
Bhi01g00242 Bhi-Chr1:4578991 Bhi12g01507 Bhi-Chr12:48584092 8.65E-77 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi12g00682 . 1 134 NADPH P450 reductases AT5G53560 78.4 1.5e-58 223.0
Bhi01g00242 . 1 133 NADPH P450 reductases AT5G53560 68.4 2.3e-51 199.1
Bhi12g01507 . 1 133 NADPH P450 reductases AT5G53560 66.9 4.7e-49 191.4
Bhi05g00080 . 4 131 NADPH P450 reductases AT5G53560 66.4 7.6e-47 184.1
Bhi07g01647 . 45 175 NADPH P450 reductases AT5G53560 65.4 9.9e-47 183.7
Bhi05g00078 . 4 159 NADPH P450 reductases AT5G53560 55.1 6.6e-43 171.0
Bhi05g00079 . 29 149 NADPH P450 reductases AT5G53560 61.3 3.4e-39 158.7
Bhi05g00081 . 26 128 NADPH P450 reductases AT5G53560 69.9 1.7e-38 156.4
Bhi01g00242 . 1 132 NADPH P450 reductases AT5G48810 64.9 1.2e-47 186.8
Bhi12g01507 . 1 133 NADPH P450 reductases AT5G48810 62.2 2.5e-45 179.1
Bhi12g00682 . 1 134 NADPH P450 reductases AT5G48810 59.6 2.8e-44 175.6
Bhi05g00080 . 2 132 NADPH P450 reductases AT5G48810 60.9 3.7e-44 175.3
Bhi07g01647 . 45 174 NADPH P450 reductases AT5G48810 60.4 7.6e-42 167.5
Bhi05g00078 . 2 160 NADPH P450 reductases AT5G48810 50.3 9.3e-40 160.6
Bhi01g00242 . 22 133 NADPH P450 reductases AT2G32720 84.8 1.1e-50 196.8
Bhi12g01507 . 22 133 NADPH P450 reductases AT2G32720 79.5 8.4e-46 180.6
Bhi07g01647 . 66 175 NADPH P450 reductases AT2G32720 79.5 3.2e-45 178.7
Bhi05g00079 . 40 150 NADPH P450 reductases AT2G32720 72.8 2.1e-41 166.0
Bhi05g00080 . 21 132 NADPH P450 reductases AT2G32720 71.4 2.8e-41 165.6
Bhi05g00081 . 18 129 NADPH P450 reductases AT2G32720 72.3 8.1e-41 164.1
Bhi05g00078 . 57 160 NADPH P450 reductases AT2G32720 75.0 3.1e-40 162.2
Bhi12g00682 . 22 133 NADPH P450 reductases AT2G32720 65.2 1.5e-39 159.8
Bhi04g01160 . 1 130 NADPH P450 reductases AT1G26340 53.7 3.2e-37 152.1
Bhi03g02557 . 2 281 NADPH P450 reductases AT5G17770 80.0 4.3e-129 458.4
Bhi11g02743 . 2 280 NADPH P450 reductases AT5G17770 76.7 8.5e-125 444.1
Bhi10g00465 . 1 282 NADPH P450 reductases AT5G17770 71.7 2.4e-119 426.0
Bhi12g00682 . 1 134 NADPH P450 reductases AT5G53560 78.4 1.5e-58 223.0
Bhi01g00242 . 1 133 NADPH P450 reductases AT5G53560 68.4 2.3e-51 199.1
Bhi12g01507 . 1 133 NADPH P450 reductases AT5G53560 66.9 4.7e-49 191.4
Bhi05g00080 . 4 131 NADPH P450 reductases AT5G53560 66.4 7.6e-47 184.1
Bhi07g01647 . 45 175 NADPH P450 reductases AT5G53560 65.4 9.9e-47 183.7
Bhi05g00078 . 4 159 NADPH P450 reductases AT5G53560 55.1 6.6e-43 171.0
Bhi05g00079 . 29 149 NADPH P450 reductases AT5G53560 61.3 3.4e-39 158.7
Bhi05g00081 . 26 128 NADPH P450 reductases AT5G53560 69.9 1.7e-38 156.4
Bhi01g00242 . 1 132 NADPH P450 reductases AT5G48810 64.9 1.2e-47 186.8
Bhi12g01507 . 1 133 NADPH P450 reductases AT5G48810 62.2 2.5e-45 179.1
Bhi12g00682 . 1 134 NADPH P450 reductases AT5G48810 59.6 2.8e-44 175.6
Bhi05g00080 . 2 132 NADPH P450 reductases AT5G48810 60.9 3.7e-44 175.3
Bhi07g01647 . 45 174 NADPH P450 reductases AT5G48810 60.4 7.6e-42 167.5
Bhi05g00078 . 2 160 NADPH P450 reductases AT5G48810 50.3 9.3e-40 160.6
Bhi01g00242 . 22 133 NADPH P450 reductases AT2G32720 84.8 1.1e-50 196.8
Bhi12g01507 . 22 133 NADPH P450 reductases AT2G32720 79.5 8.4e-46 180.6
Bhi07g01647 . 66 175 NADPH P450 reductases AT2G32720 79.5 3.2e-45 178.7
Bhi05g00079 . 40 150 NADPH P450 reductases AT2G32720 72.8 2.1e-41 166.0
Bhi05g00080 . 21 132 NADPH P450 reductases AT2G32720 71.4 2.8e-41 165.6
Bhi05g00081 . 18 129 NADPH P450 reductases AT2G32720 72.3 8.1e-41 164.1
Bhi05g00078 . 57 160 NADPH P450 reductases AT2G32720 75.0 3.1e-40 162.2
Bhi12g00682 . 22 133 NADPH P450 reductases AT2G32720 65.2 1.5e-39 159.8
Bhi04g01160 . 1 130 NADPH P450 reductases AT1G26340 53.7 3.2e-37 152.1
Bhi03g02557 . 2 281 NADPH P450 reductases AT5G17770 80.0 4.3e-129 458.4
Bhi11g02743 . 2 280 NADPH P450 reductases AT5G17770 76.7 8.5e-125 444.1
Bhi10g00465 . 1 282 NADPH P450 reductases AT5G17770 71.7 2.4e-119 426.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000252 4 9 3 5 3 5 9 4 4 3 4 4 8 5 5 9 5 6 9 4 5 4 5 5 4 4 4 10 5 2 156
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi01g00242 Bhi_Chr01 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 25.671389 22.852493 24.498377