Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00269 ACAGAAAGAGACCTATGTTTGAATCTTCCAAAACCTACATTTCCTTCTAATTTGAAAATCCCATCAAACTAAGAGAGAGAGAAAAAGAAATGAAAATGGAAAGAAAATATTATATACCTTGTGATTCTCAAACCGCAAAGTCAGCTCCATATATGTTTACATATACATATTTGTTTTGTCTTTCAGTAAGCTTTGCTTAGCTTTTCCTGAAAGAACGCTAGAAGCAAGCAAGGCAGAGATGAGCTTGAGGTGCAGCGGCGGAAGTTGCACAGAAAGCAAGGGCGGTGGCAGCAATGGCAGCGGTGGACCGTGTGGGGCGTGCAAGTTTCTGCGGAGGAAATGTATGCCAGAGTGTATATTTGCACCCTACTTCGACTCTGAACACGGTACAACTCATTTTGCAGCTGTGCACAAGGTGTTCGGAGCAAGCAATGTCTCAAAGATGCTTCAACATATTCCTGAACACAAACGGCTCGATGCAGCTATAACTATATGTTACGAGGCACAAGCTCGAATCAGAGAACCAGTTTTTGGCTGTGTTGCTCACATCTTTGCCCTTCAACAACAGGCTGCAAGGCTGCAAGTAGAGATCTCATATTTGCAAGCTTACCTAGCAACATCGGAGCTTCCAAGACCCGCACCCCATCTACAGGCACAACTACCAGCTCTGGTCAAGAAGCCAACTCTATCCTCCATTGTAAACCTTCCATCAGATTGCCCTCCTTTTCCTGCTGAATCAGATCTTTCTCCACTTCTTGATCCCGTCGAGCAAGCTTCACGGCCAAAATTGCAGTCTCCATTGGAATTGTACCAAATTGGGAGCAACAATTTCCCATCCATGGGCAGCATTGATCAACAAGTTGTCCAAAAACAACCGTCTTCGATGCAATGCATTGATGCCTCACTGTTTCCGAACGTCCCTAAACGAGCCTAACGGGTGATTAGACTGCTAATCTCAGGGTTTCTC 967 44.88 MSLRCSGGSCTESKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEHGTTHFAAVHKVFGASNVSKMLQHIPEHKRLDAAITICYEAQARIREPVFGCVAHIFALQQQAARLQVEISYLQAYLATSELPRPAPHLQAQLPALVKKPTLSSIVNLPSDCPPFPAESDLSPLLDPVEQASRPKLQSPLELYQIGSNNFPSMGSIDQQVVQKQPSSMQCIDASLFPNVPKRA 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5111848 5113087 + XM_039047121.1 Bhi01g00269 23042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00269 231 MobiDBLite consensus disorder prediction 1 22 - -
Bhi01g00269 231 Pfam Lateral organ boundaries (LOB) domain 24 122 IPR004883 -
Bhi01g00269 231 ProSiteProfiles LOB domain profile. 23 125 IPR004883 -
Bhi01g00269 231 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 2 182 - -
Bhi01g00269 231 MobiDBLite consensus disorder prediction 1 18 - -
Bhi01g00269 231 PANTHER LOB DOMAIN CONTAINING PROTEIN 2 182 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00269 Bhi-Chr1:5111848 Bhi12g02627 Bhi-Chr12:81164454 7.88E-48 dispersed
Bhi01g00269 Bhi-Chr1:5111848 Bhi05g02025 Bhi-Chr5:62169715 2.64E-36 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13 PF03195 LOB 4.10E-37 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00269 K21994 - csv:101216934 408.683