Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00337 ATAATTCTTTTCCTACTCATTACTCATTACACCCTTATCACCAAAAGTCAGCGCCTTCTTTTGTCTCTATTTTTCTCTCTTAGAACAACCAAAAAAAAAAAAAAAAAAAGCAACTGATCAAGAAGAAGCTGAGACAAAGGTACAGATTCTCAGAGCAGAGTTCTGTCTTTGATAATGGAAGTCGATTGGGATCTTCACGCCGTCGTCAGAGGCTACTCCGCCGTGTCCTCCACCGCCACCATCATTCCCTCTTCTTCTTCTTCCTCTTCCAATAACTCCATCCCTTTTTCTTTTAGCAGAGACCTAACCAACCAAACAAAAAATCATTTCTTCTCCCTTCAAGATCCATTTCAACCACCTAATTGCAATTCCACTCAAGAATTGCATGAGCTTTTCAAACCCTTTTTCCCCAAATCTCAACCCTCTCCTCCGCCGCCTCCTCCACCGCCTGCTCCGCCGCTTCTTTCCTCTCCGGCTGCTAAAATTCTGACCCCTCCGAAGCAACAACAGAGCACCCATCTCCCCAAACAGCTCCATTCAACCTCTGTTTCTGCTCCGAGATCCAAACGCCGGAAGAATCAGCTGAAGAAAGTCTGCCAAGTTCCGGCGGAGTCTCTGTCTTCGGATATTTGGGCTTGGCGAAAATATGGCCAAAAACCCATTAAAGGATCTCCATATCCAAGGGGATATTACAGATGTAGCAGTTCGAAGGGTTGCATGGCCAGAAAACAAGTCGAGAGGAACAGATCCGACCCGGGAATGTTCATAGTCACTTACACGGCGGAGCACAACCACCCGGCGCCGACTCACCGGAACTCCCTCGCCGGCTCCACTCGTCAGAAACCCATCACACCGACGCCCACCGCTTCCGGATCTGGAAAACCCGACCCGAAACAGCCGGTTTGCTCGTCGGAAGAACAGAGTACGATCACAGAGAGCAAAGAAGAGAAAGAGGAACTATTAATGGCTGAAGATGAAGAAGACGACGATCTGGGGGTCTCCGATTTGATCGTCAACGACGATTTCTATGTGGGTTTTGAAGAACTCGACAGCCCAATCACGGACGACTGTTTTTCTGATCCGTTTCCGGCGAATTTTGACCTTCCATGGTTGTTTAATGGAAACCCAGACAGCGAAATTGTAAAACTCCCCTGTTAAATTAATCTTCAACTTTTTTTTTTTTTTTTTTTTTTTCCCTTTTCCAATAGAGATCTGTAAAATCAAAGAAGTTAGAGCAAAGATTTTAACAAGTGTTTTTAGCGAGAGCAAGCAAGATAGATGATTTCATCTTCTTTCTCTGTATCCTTTTGTTTATTTTTTTCCCTGTAATTTTAGAAGAACAGTGATCTTGAAGTTGAAGATTCAGTGGGTTTTGCGAGAATTTTTGAGGGAAAAAGGAATAAACTGCAAAAGGGGTTGACTAATTAAAAGAAATGAAATGGAATCAAAGCGATGAATGACGTGTAAATGGCGTTGACAGAGATGGAAATTAGAGAGATTAAAAGCAGAGGTTGAAGAAAAAATGGTTATGGAGGAAGACGAAGAATATGCTTCTTTTTCAAAATGCTTGTCCGAGGACAACAATGGTGGTGGAGAATCAGTTTTTTTTTTTTTTTTTTTTTTTTTTAATAGAAAAAAATGAGGATTTGGAATTTTTCTTTAGTAGTTGATGCCAGTTGGGTCATATTGGTAAGGATAAATGGTAGCCATTCAACATCAATATGTGTATAATTGCATCCAAAATTTTAATTTGTGTTTTGCATTTTTTCTTTAAATTTTTTGATAGAGAGATTCTGTTTTTTATGTACGGCTCAACTTTTATTTTGT 1827 41.27 MEVDWDLHAVVRGYSAVSSTATIIPSSSSSSSNNSIPFSFSRDLTNQTKNHFFSLQDPFQPPNCNSTQELHELFKPFFPKSQPSPPPPPPPPAPPLLSSPAAKILTPPKQQQSTHLPKQLHSTSVSAPRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCMARKQVERNRSDPGMFIVTYTAEHNHPAPTHRNSLAGSTRQKPITPTPTASGSGKPDPKQPVCSSEEQSTITESKEEKEELLMAEDEEDDDLGVSDLIVNDDFYVGFEELDSPITDDCFSDPFPANFDLPWLFNGNPDSEIVKLPC 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6101123 6103128 + XM_039024777.1 Bhi01g00337 23110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00337 327 MobiDBLite consensus disorder prediction 104 126 - -
Bhi01g00337 327 MobiDBLite consensus disorder prediction 76 146 - -
Bhi01g00337 327 MobiDBLite consensus disorder prediction 207 235 - -
Bhi01g00337 327 ProSiteProfiles WRKY domain profile. 144 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi01g00337 327 MobiDBLite consensus disorder prediction 79 98 - -
Bhi01g00337 327 Pfam WRKY DNA -binding domain 151 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bhi01g00337 327 Gene3D WRKY domain 133 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi01g00337 327 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 310 - -
Bhi01g00337 327 MobiDBLite consensus disorder prediction 204 274 - -
Bhi01g00337 327 SUPERFAMILY WRKY DNA-binding domain 147 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bhi01g00337 327 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 310 IPR044810 GO:0003700
Bhi01g00337 327 SMART WRKY_cls 149 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00337 Bhi-Chr1:6101123 Bhi12g00774 Bhi-Chr12:23250334 4.34E-49 dispersed
Bhi01g00337 Bhi-Chr1:6101123 Bhi08g00957 Bhi-Chr8:31343562 3.90E-46 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
27 PF03106 WRKY 4.30E-25 CL0274 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00337 K13425 - csv:101217082 493.041