Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00349 ACTTTGACTAGTTTATTGCAAAATTCAGTAAAGAGCGATGTTGGAAAATGAGAGACTGCTTCCAGAATCAGTCCTATTTGAACTTCCATTTCAACAAAATTTGGAGGAGTTGGCTTCTTCTTCAGTTCCACGAAGTTTCTCCTTCAATGAATCAGCGAATCGCGTCAATTGGCAATACAGAGAGCTCAAGACAGATCGGTGCAGTCTCAAGCAGAGAGATCGAAGAAGAGCCCGTGGAAGCTATTAGTGAAGATAAAATTTGTGTTGCTGTCGGGAAAGATGTGAAAGAGTGCTTATCAGTTTTGAGATATGCACTAAAATCCTCACGTGGGAAGAAGATCTGCCTCCTCCATGTTCATGTCCCCGCACAGATGATTCCGTTAATGGGAACCAAGTTTCCAGCAAACTCATTGGAGAAAGAGGAGGTGAGAGCATATCACGAGTTTGAGAAGCAAAATTTGCCTAGGGTCATGAATGAGTATATTCTGTACTGTCTTCAAGAAGGGGTTCATGCTGATAAATTATGTGGTGAAGCTGAGTGTATTGAAAAGGGAATAGTTGATATGATCTCCCTGCACAGGGTTAATAAGCTTGTTATGGGAGCAGCTGTAGACAAGTGTTATTCAAGGAGAATGGTGGATCTGAAGTCTAAGAAAGCCATCTACGTGCGTTCACATGCACCGGCTTTCTGTCACATTGAGTTCATTTGCAAGGGGAACCTCATCTGCGCCAGGGAGGGTAGATCAGATGAAGCCCAAGTAGAAACCATCATCACATCACCACAATCAAGTCCAGACGCTGTATCCTTAGAAATTACCCACCGGAGATCTCAGTCTCTGCCACTGGGACAGGTTAATAGCAGGGAAATTGGAAGTTCATCTTCCAATTTACGTTCTAGAGGGAGATTATTGCTTGTTGACCATTTTAGAAGGAGCATACTAGATCCTTCTTCTCCAGATATAATGAATGGGGTTCATACTGCAAGAAACTTGGATGTTAACGAGGCTATGGATGAATGGGGTTCATTAAGGAAAAGTCCTTCTGAAAGGTCAGACAATTCCATATGCTCTCCTTGTGGTGTGATTGATATGGCTTCGTCACCACTTTGTATGGTTGAGTTATGTGCAGGGCTCGAGCAGTATGGGAAGATCAGTGATAACCTTTACAATCAATGTGAATGTGTGATGATGGAGGCTGCAAATGCAAGGCATGACGCATTTTTAGGGGCAATTGCATGTAGAAAATCCGAGAAAGAGACTGTTAAAGCTCTACACAGGGTTAGAGCTGCAGAAGGGTTATATGCCGAAGAACTGAAACAAAGGAAGAAGGTTGAACAAGAGTTAGCGAAGGAAAAGGCAAAACTTGAAAGTATAAAGACACAACTAAATAAAGAGATGGAAGAGCTCTTGGTTGCACAAGATCAGAAGGCAAGTCTAGAGAGAGATCTTTTAGAATCTGATCTAGCCGCAAAGGAGTTGGAGCAAAAGTTTCTTTCTGCTGTTGAATTGTTACAGAGTTACAAAAGAGAGCGAGAGGAATTGCAGATTCAATGCGACAATGCACTTAGAGAAGCAGAGGAGTTTAGAAAAAACCAATCCACAGACCGATACCTTCCACGGTTCTTTACTGAGTTCCCTTTTCGGGAGATCGAGGAAGCAACTAATAACTTTGATCCCTCCCTGAAGATTGGAGAAGGGGGATATGGAAGTATATTCCGAGGTAACTTGCGTCATACTATGGTGGCTATAAAAATCCTTCATCCTGATAGTTCTCAAGGCCCGTCTGAATTTCAACAGGAGGTTAATGTATTGAGTAAGATGAGGCATCCCAATCTTGTCATGCTCATTGGTGCCTGTCCTGAAGCTTGGGTTCTCATCTATGAATACCTCTGTAATGGAAGCCTTGAAGATAGGCTAAGCTGCAAGGATAATACTCCACCTTTATCTTGGCAAACACGAATACGCATTGCCACCGAGTTATGCTCAGCCCTTATGTTTCTTCACTCAAGTAAGCCCCACAGCATCATTCATGGTGACTTGAAACCTGCAAATGTATTACTTGATGCAAATCTTTCATGCAAGCTTGGCGACTTTGGAATTTGTCGCTTATTGTCTCGAGATGAAATGCTAAACAGCGAAACCCTTGTTTGGAGAACTGACAATCCCAAGGGGACTTTTGCTTACATGGATCCTGAATTCCTTTCATCTGGAGAGCAAACAACAAAGTCAGATGTTTATTCATTTGGGATAATACTTTTGCGGTTATTGACCGGTAGGTCTGCAATGGGGATATCAAAGGAAGTGCAATATGCAATAGGAAATGGAAAGTTAGAATCCATTTTGGATCCTTTAGCAGGAGATTGGCCATTTGTTCAGGCCGAACAGCTCGCTCGATTGGCATTGAGGTGTTGTGATTTGAAGCGAAAGAGCCGCCCCGATCTCATTACTGATGTCTGGAGGGTGCTTGGACCAATGAGGGCTTCCTGTGGAGGCCCATTGTCTGTCCAGCTCGGTTCTGCCGAACACTCGCAACCTCCCCCTTATTTTATCTGCCCCATCTTTCAGGAAGTCATGCAAGATCCACATGTGGCTGCGGATGGTTTTACATATGAAGCGGAGGCTCTGAGAGGATGGCTAGACAGTGGACACGATACTTCGCCAATGACGAATCTTAGGCTCGAGCACGGGAACCTTGTCCCAAACCGTGCTCTTCGCTCTGCTATCCAGGAGTGGCTTCAACGGAACTGAAACGTTCCCATTTGTCGGTCACCAAATATGAAGAATGTGAGGAAAGGAAAAAAAAAGAGGGGGACTGGGAGGAAGTCACGGTATCTGCAACTATTCTTCTTTCATATTGCTCCCCCTCTTCTGTTTTCCTTTAGTAGTGAGTTAATATTTTAGTGTGTTTTTTATAGCTTATACAGTTTAGCGGATACGTAAAAAATGCTATCTGTTTGGATATTTATTTGTGATTAAGAAGACACTAAGCTGCGTGCCATTTGTATATAACAACGCATGGATTTTTGCCTCTTA 3032 43.17 MRDCFQNQSYLNFHFNKIWRSWLLLQFHEVSPSMNQRIASIGNTESSRQIGAVSSREIEEEPVEAISEDKICVAVGKDVKECLSVLRYALKSSRGKKICLLHVHVPAQMIPLMGTKFPANSLEKEEVRAYHEFEKQNLPRVMNEYILYCLQEGVHADKLCGEAECIEKGIVDMISLHRVNKLVMGAAVDKCYSRRMVDLKSKKAIYVRSHAPAFCHIEFICKGNLICAREGRSDEAQVETIITSPQSSPDAVSLEITHRRSQSLPLGQVNSREIGSSSSNLRSRGRLLLVDHFRRSILDPSSPDIMNGVHTARNLDVNEAMDEWGSLRKSPSERSDNSICSPCGVIDMASSPLCMVELCAGLEQYGKISDNLYNQCECVMMEAANARHDAFLGAIACRKSEKETVKALHRVRAAEGLYAEELKQRKKVEQELAKEKAKLESIKTQLNKEMEELLVAQDQKASLERDLLESDLAAKELEQKFLSAVELLQSYKREREELQIQCDNALREAEEFRKNQSTDRYLPRFFTEFPFREIEEATNNFDPSLKIGEGGYGSIFRGNLRHTMVAIKILHPDSSQGPSEFQQEVNVLSKMRHPNLVMLIGACPEAWVLIYEYLCNGSLEDRLSCKDNTPPLSWQTRIRIATELCSALMFLHSSKPHSIIHGDLKPANVLLDANLSCKLGDFGICRLLSRDEMLNSETLVWRTDNPKGTFAYMDPEFLSSGEQTTKSDVYSFGIILLRLLTGRSAMGISKEVQYAIGNGKLESILDPLAGDWPFVQAEQLARLALRCCDLKRKSRPDLITDVWRVLGPMRASCGGPLSVQLGSAEHSQPPPYFICPIFQEVMQDPHVAADGFTYEAEALRGWLDSGHDTSPMTNLRLEHGNLVPNRALRSAIQEWLQRN 899
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6217968 6224034 - XM_039038569.1 Bhi01g00349 23122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00349 899 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 33 66 895 - -
Bhi01g00349 899 PANTHER OS02G0152300 PROTEIN 66 895 - -
Bhi01g00349 899 Gene3D Phosphorylase Kinase; domain 1 521 613 - -
Bhi01g00349 899 CDD STK_N 70 223 - -
Bhi01g00349 899 Coils Coil 411 515 - -
Bhi01g00349 899 Pfam Protein kinase domain 546 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi01g00349 899 Pfam U-box domain 830 899 IPR003613 GO:0004842|GO:0016567
Bhi01g00349 899 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 827 899 IPR013083 -
Bhi01g00349 899 CDD RING-Ubox_WDSUB1_like 833 874 - -
Bhi01g00349 899 ProSiteProfiles Protein kinase domain profile. 541 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi01g00349 899 ProSitePatterns Protein kinases ATP-binding region signature. 547 568 IPR017441 GO:0005524
Bhi01g00349 899 SUPERFAMILY Protein kinase-like (PK-like) 515 798 IPR011009 -
Bhi01g00349 899 SUPERFAMILY RING/U-box 824 899 - -
Bhi01g00349 899 Gene3D Transferase(Phosphotransferase) domain 1 614 812 - -
Bhi01g00349 899 ProSiteProfiles U-box domain profile. 828 899 IPR003613 GO:0004842|GO:0016567
Bhi01g00349 899 SMART Ubox_2 832 895 IPR003613 GO:0004842|GO:0016567
Bhi01g00349 899 SMART serkin_6 541 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi01g00349 899 ProSitePatterns Serine/Threonine protein kinases active-site signature. 659 671 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00349 Bhi-Chr1:6217968 Bhi12g01858 Bhi-Chr12:59406607 0 dispersed
Bhi10g00698 Bhi-Chr10:15162373 Bhi01g00349 Bhi-Chr1:6217968 3.89E-158 dispersed
Bhi10g00699 Bhi-Chr10:15162970 Bhi01g00349 Bhi-Chr1:6217968 2.13E-139 dispersed
Bhi01g00349 Bhi-Chr1:6217968 Bhi01g00350 Bhi-Chr1:6217968 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87279 PF00069 Pkinase 1.60E-40 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00349 - - bhj:120083047 1779.22