Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00350 CTTTGACTAGTTTATTGCAAAATTCAGTAAAGAGCGATGTTGGAAAATGAGAGACTGCTTCCAGAATCAGTCCTATTTGAACTTCCATTTCAACAAAATTTGGAGGAGTTGGCTTCTTCTTCAGTTCCACGAAGTTTCTCCTTCAATGAATCAGCGAATCGCGTCAATTGGCAATACAGAGAGCTCAAGACAGATCGGTGCAGTCTCAAGCAGAGAGATCGAAGAAGAGCCCGTGGAAGCTATTAGTGAAGATAAAATTTGTGTTGCTGTCGGGAAAGATGTGAAAGAGTGCTTATCAGTTTTGAGATATGCACTAAAATCCTCACGTGGGAAGAAGATCTGCCTCCTCCATGTTCATGTCCCCGCACAGATGATTCCGTTAATGGGAACCAAGTTTCCAGCAAACTCATTGGAGAAAGAGGAGGTGAGAGCATATCACGAGTTTGAGAAGCAAAATTTGCCTAGGGTCATGAATGAGTATATTCTGTACTGTCTTCAAGAAGGGGTTCATGCTGATAAATTATGTGGTGAAGCTGAGTGTATTGAAAAGGGAATAGTTGATATGATCTCCCTGCACAGGGTTAATAAGCTTGTTATGGGAGCAGCTGTAGACAAGTGTTATTCAAGGAGAATGGTGGATCTGAAGTCTAAGAAAGCCATCTACGTGCGTTCACATGCACCGGCTTTCTGTCACATTGAGTTCATTTGCAAGGGGAACCTCATCTGCGCCAGGGAGGGTAGATCAGATGAAGCCCAAGTAGAAACCATCATCACATCACCACAATCAAGTCCAGACGCTGTATCCTTAGAAATTACCCACCGGAGATCTCAGTCTCTGCCACTGGGACAGGTTAATAGCAGGGAAATTGGAAGTTCATCTTCCAATTTACGTTCTAGAGGGAGATTATTGCTTGTTGACCATTTTAGAAGGAGCATACTAGATCCTTCTTCTCCAGATATAATGAATGGGGTTCATACTGCAAGAAACTTGGATGTTAACGAGGCTATGGATGAATGGGGTTCATTAAGGAAAAGTCCTTCTGAAAGGTCAGACAATTCCATATGCTCTCCTTGTGGTGTGATTGATATGGCTTCGTCACCACTTTGTATGGTTGAGTTATGTGCAGGGCTCGAGTATGGGAAGATCAGTGATAACCTTTACAATCAATGTGAATGTGTGATGATGGAGGCTGCAAATGCAAGGCATGACGCATTTTTAGGGGCAATTGCATGTAGAAAATCCGAGAAAGAGACTGTTAAAGCTCTACACAGGGTTAGAGCTGCAGAAGGGTTATATGCCGAAGAACTGAAACAAAGGAAGAAGGTTGAACAAGAGTTAGCGAAGGAAAAGGCAAAACTTGAAAGTATAAAGACACAACTAAATAAAGAGATGGAAGAGCTCTTGGTTGCACAAGATCAGAAGGCAAGTCTAGAGAGAGATCTTTTAGAATCTGATCTAGCCGCAAAGGAGTTGGAGCAAAAGTTTCTTTCTGCTGTTGAATTGTTACAGAGTTACAAAAGAGAGCGAGAGGAATTGCAGATTCAATGCGACAATGCACTTAGAGAAGCAGAGGAGTTTAGAAAAAACCAATCCACAGACCGATACCTTCCACGGTTCTTTACTGAGTTCCCTTTTCGGGAGATCGAGGAAGCAACTAATAACTTTGATCCCTCCCTGAAGATTGGAGAAGGGGGATATGGAAGTATATTCCGAGGTAACTTGCGTCATACTATGGTGGCTATAAAAATCCTTCATCCTGATAGTTCTCAAGGCCCGTCTGAATTTCAACAGGAGGTTAATGTATTGAGTAAGATGAGGCATCCCAATCTTGTCATGCTCATTGGTGCCTGTCCTGAAGCTTGGGTTCTCATCTATGAATACCTCTGTAATGGAAGCCTTGAAGATAGGCTAAGCTGCAAGGATAATACTCCACCTTTATCTTGGCAAACACGAATACGCATTGCCACCGAGTTATGCTCAGCCCTTATGTTTCTTCACTCAAGTAAGCCCCACAGCATCATTCATGGTGACTTGAAACCTGCAAATGTATTACTTGATGCAAATCTTTCATGCAAGCTTGGCGACTTTGGAATTTGTCGCTTATTGTCTCGAGATGAAATGCTAAACAGCGAAACCCTTGTTTGGAGAACTGACAATCCCAAGGGGACTTTTGCTTACATGGATCCTGAATTCCTTTCATCTGGAGAGCAAACAACAAAGTCAGATGTTTATTCATTTGGGATAATACTTTTGCGGTTATTGACCGGTAGGTCTGCAATGGGGATATCAAAGGAAGTGCAATATGCAATAGGAAATGGAAAGTTAGAATCCATTTTGGATCCTTTAGCAGGAGATTGGCCATTTGTTCAGGCCGAACAGCTCGCTCGATTGGCATTGAGGTGTTGTGATTTGAAGCGAAAGAGCCGCCCCGATCTCATTACTGATGTCTGGAGGGTGCTTGGACCAATGAGGGCTTCCTGTGGAGGCCCATTGTCTGTCCAGCTCGGTTCTGCCGAACACTCGCAACCTCCCCCTTATTTTATCTGCCCCATCTTTCAGGAAGTCATGCAAGATCCACATGTGGCTGCGGATGGTTTTACATATGAAGCGGAGGCTCTGAGAGGATGGCTAGACAGTGGACACGATACTTCGCCAATGACGAATCTTAGGCTCGAGCACGGGAACCTTGTCCCAAACCGTGCTCTTCGCTCTGCTATCCAGGAGTGGCTTCAACGGAACTGAAACGTTCCCATTTGTCGGTCACCAAATATGAAGAATGTGAGGAAAGGAAAAAAAAAGAGGGGGACTGGGAGGAAGTCACGGTATCTGCAACTATTCTTCTTTCATATTGCTCCCCCTCTTCTGTTTTCCTTTAGTAGTGAGTTAATATTTTAGTGTGTTTTTTATAGCTTATACAGTTTAGCGGATACGTAAAAAATGCTATCTGTTTGGATATTTATTTGTGATTAAGAAGACACTAAGCTGCGTGCCATTTGTATATAACAACGCATGGATTTTTGCCTCTTA 3028 43.16 MRDCFQNQSYLNFHFNKIWRSWLLLQFHEVSPSMNQRIASIGNTESSRQIGAVSSREIEEEPVEAISEDKICVAVGKDVKECLSVLRYALKSSRGKKICLLHVHVPAQMIPLMGTKFPANSLEKEEVRAYHEFEKQNLPRVMNEYILYCLQEGVHADKLCGEAECIEKGIVDMISLHRVNKLVMGAAVDKCYSRRMVDLKSKKAIYVRSHAPAFCHIEFICKGNLICAREGRSDEAQVETIITSPQSSPDAVSLEITHRRSQSLPLGQVNSREIGSSSSNLRSRGRLLLVDHFRRSILDPSSPDIMNGVHTARNLDVNEAMDEWGSLRKSPSERSDNSICSPCGVIDMASSPLCMVELCAGLEYGKISDNLYNQCECVMMEAANARHDAFLGAIACRKSEKETVKALHRVRAAEGLYAEELKQRKKVEQELAKEKAKLESIKTQLNKEMEELLVAQDQKASLERDLLESDLAAKELEQKFLSAVELLQSYKREREELQIQCDNALREAEEFRKNQSTDRYLPRFFTEFPFREIEEATNNFDPSLKIGEGGYGSIFRGNLRHTMVAIKILHPDSSQGPSEFQQEVNVLSKMRHPNLVMLIGACPEAWVLIYEYLCNGSLEDRLSCKDNTPPLSWQTRIRIATELCSALMFLHSSKPHSIIHGDLKPANVLLDANLSCKLGDFGICRLLSRDEMLNSETLVWRTDNPKGTFAYMDPEFLSSGEQTTKSDVYSFGIILLRLLTGRSAMGISKEVQYAIGNGKLESILDPLAGDWPFVQAEQLARLALRCCDLKRKSRPDLITDVWRVLGPMRASCGGPLSVQLGSAEHSQPPPYFICPIFQEVMQDPHVAADGFTYEAEALRGWLDSGHDTSPMTNLRLEHGNLVPNRALRSAIQEWLQRN 898
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6217968 6224033 - XM_039038577.1 Bhi01g00350 23123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00350 898 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 33 66 894 - -
Bhi01g00350 898 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672|GO:0006468
Bhi01g00350 898 Gene3D Transferase(Phosphotransferase) domain 1 613 811 - -
Bhi01g00350 898 Coils Coil 410 514 - -
Bhi01g00350 898 CDD RING-Ubox_WDSUB1_like 832 873 - -
Bhi01g00350 898 SUPERFAMILY Protein kinase-like (PK-like) 514 797 IPR011009 -
Bhi01g00350 898 CDD STK_N 70 223 - -
Bhi01g00350 898 ProSiteProfiles Protein kinase domain profile. 540 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi01g00350 898 PANTHER OS02G0152300 PROTEIN 66 894 - -
Bhi01g00350 898 ProSitePatterns Protein kinases ATP-binding region signature. 546 567 IPR017441 GO:0005524
Bhi01g00350 898 Pfam U-box domain 829 898 IPR003613 GO:0004842|GO:0016567
Bhi01g00350 898 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 826 898 IPR013083 -
Bhi01g00350 898 ProSiteProfiles U-box domain profile. 827 898 IPR003613 GO:0004842|GO:0016567
Bhi01g00350 898 Gene3D Phosphorylase Kinase; domain 1 520 612 - -
Bhi01g00350 898 SUPERFAMILY RING/U-box 823 898 - -
Bhi01g00350 898 SMART serkin_6 540 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi01g00350 898 SMART Ubox_2 831 894 IPR003613 GO:0004842|GO:0016567
Bhi01g00350 898 Pfam Protein kinase domain 545 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi01g00350 Bhi12g01859 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00350 Bhi-Chr1:6217968 Bhi12g01858 Bhi-Chr12:59406607 0 dispersed
Bhi01g00349 Bhi-Chr1:6217968 Bhi01g00350 Bhi-Chr1:6217968 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87280 PF00069 Pkinase 1.60E-40 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00350 - - bhj:120083047 1772.67