Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00412 GAGAAGCAAAAAGTATAATTTTTATTTTTATTTTCAGAGATAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAGTCAACCAACCATTTTTGGAGTTTCCACTCTTCACCGATTCCATCTCAATCTCCGGTTTCTTCATGAGTTTTCTACCACGGTTCCACTCTAGAGGCGGCGGCGGCGGCGATAGTCTTATGGCCTCTGGTGCTATTGCTCAGCCACATCTTGTTACTCAATCTTCTTTCGCCAAATCAATGTTCTCTTCCCCCACGCTCTCTCTCGCTCTCACGAATATCGATGGGCTCGGCGCCGGGGAGATGATTCCAGCGGATGTTAGGAGGAGGAATAGAGAGGAAGAGGCAGCGGAGAGTAGATCTGGGAGCGAGAACATGGTGGACGGTGGTTCCGGCGAGGAAGTGGAGGGCGGCGGCGGTGGTGGTAGGAAGAAGAGGAAAAAACGGTACCACCGTCACAGTGCGGAACAGATTCAAGAACTGGAAGCTATGTTCAAAGAATGTCCTCATCCTGATGAAAAACAACGATTGGAGCTCAGTAGAAGACTCTCTTTAGAAACTAAACAAGTTAAATTCTGGTTTCAAAATCGTCGAACTCAAATGAAGACACAGTTGGAACGCCATGAGAACACATTACTAAGACAAGAGAATGAGAAGCTCCGTGCAGAGAACATGGCAATTCGAGAGGCCATGAGGGATCCAATCTGCTCCAACTGCGGCGGACCGGCCATCATCGGAGAGATCTCCATCGAAGAACAGCAACTCCGAATTGAAAACGCAAGATTAAAGGACGAATTGGATCGGGTGTGTGCCCTGGCTGGAAAATTCCTGGGACGGGCAGCGGTTCCGGTATCGCCACCATTGGCATCGAGCTCGTGTTTGGAGGAATATGGAGGTGGTGGAACGATGATGATGGAGAGATGTGTGTATTTGGAGATGGGTTTAGCAGCCATGGATGAGGTTGTGAAAATGGCAAATGAGGAAGAGCCATTGTGGGTTAGAGAGAAACTGAATGAAGAAGAATATTTGAGAATGTTCAGTGGGATTAAACACATTAATAATGGGTTTGTTTCTGAGGCTTCTAGACAAACTGCTCTTGTCTTCCTCAACACTTCTGCTCTCCTTGACACTCTCATGGATCCTGACCGGTGGGTGGACATGTTTCCGAACTTGGTCGCGACGGCTAGCATCGCCGACATAATCTCCGGCGGTCTCGGAGGAACCCGGAACGGCGCTCTTCAACTGATGCATGCAGAGCTTCAAATTCTGTCTCCAATGGTTCCGGTGAGACAGTTAAGCTTCCTTCGCTTTTGTAAGCAACACGCTGAAGGCGTTTGGGCCATCGTCGACGTCTCCATCGATCCCGTTACCGATACTTCTTCCTCTCCGTCGTGCCGGAGACTCCCCTCTGGCTGTCTCATCCACGACATGACCAATGGCTACTCCAAGGTTACTTGGGTTGAGCATTCGGAGTACGATGAAAGCTATATTCACGAGCTGTATCGGCCCCTGATTCGCTCCGGCCTTGGCTTTGGTGCGCAACGGTGGATCGCCGCCCTCCAACGCCAATCCGAGTGCCTTGCCATCCTCTCCACCCCTCTAGACCATTCTGGAATATCAGCAAATGGACGGCGGAATATGGTGAAGCTAGCGCAACGGATGACGGCAAATTTTTGTGCAGGAGTATGCGCGTCTACAGTGTACAAGTGGAACAAACTGAACACGAGGAATAACAACGTTGGAGAAGATGTGAAAGTGATGACGAGGAAGAGCGTGGAGGATCCCGGGGAGCCGCCGGGCACGGTGCTGAGTGCAGCGACGTCGGTGTGGGTGGCGGCCGCGGTGGAGAGAGTGTTTGAGTTTCTTCGTGATGAGCGGCTGAGGAGTGAGTGGGACATCCTGTCCAACGGCGGTCCCATGCAGGAAATGCTTCGTATCCCCAAATCACAACACCGTCACCATCCCAACGCCGTCTCGCTCCTCCGTGCCACCTCTCTAAATCCAAACCAGAGCAGCATGTTAATTCTACAAGAGACTTGCACCGATGCATCGGGGTCGCTTGTAGTGTACGCGCCGGTGGATATTCCGGCAATGCAGGCGGTGATGAACGGCGGGGATTCAGCCTACGTGGCATTACTACCGTCGGGGTTCGCGGTGGTGCCGGCAGAGGAGGATGGTGGCGGTGGCAGAGGGAGTTTGTTGACGGTGGCGTTTCAGATATTGGTGAATAGTTTGCCGACGGATAAGCTGACGGTGGAGTCGGTGGAGACGGTGAATAATTTGATTTCGTGTACGGTGCAAAAAATTAGAAACGCTCTCCGCTGTCACGAGCCTTCCACGTGACCCCCACCAAAGGATCTCTTCGATTTCGACCCGACGGCGACTCACCCTGCTGTGGTTTCCATTTTACCCCTCTCACCTTGAAGTTTGTGTAAGTTTTTTTTCAAAAAAAAAAAATCTTAAATTTTGTCATTTGTTTAAAATATATATTAGTTAAATTGCAAATATGGTCCCTACCGTTTCGAGAAAGTTAGAATATAGTCATGTGATTTTTAATTATAATTTAGTTATATAGTTTGATGATTTTTTCATAAATAGTCAAATAATACGACTATTTATAAGATTTTATCAAACTGTAAAAATTAAATTCTAACTTTTAAAACCATAAGAGCTAAATTCTAACATTTTATAAATTATAGGGATCAAATTTGCAATTTAACTTAAATATATCTAGTTTTTCAAAAATTTCAATATTACCTTTAGTCTTTCATAAATATTCCAAAGTTAACTTGGAGTAAAATTTTTCTTCATTATTTTTGGATGAATAGTGAGACATCTATAACGGTGATTTAAGACGATGTAATGATGTTCATGTCTCACTCCTCCTCCAACATTCAATGATGCGATGATGTTCATATGAGAATTTTGAAACCTTTATAAAAAGATCAAAGGTAATATTGCAATTTTTGAAAAAATAAAGTTATTTTTTTTTAAACAAATGAACAATTCAAGGATTTTTTTAATTATATAAATTGTTTATGATTATTATTACTTTAGAGGTAGATATGTTGAGAAAAATGTGAGGGTGGTATTGAGTCAAGAACGAACCGCCAATGTGTTGAGTATGACTCGGTGGGTGGGTTCGGGTATTGACTCTGGTCGACTCTCGTGTTGACTCATTTATCTAATTATGATATTTATTTTTATTGATAATTTGTTTTGTGGTTAGTCTGATTTAACCTGATTATATAATTTCAATGTATATTCTTTTAATATCATTCAAAAAA 3302 44.46 MSFLPRFHSRGGGGGDSLMASGAIAQPHLVTQSSFAKSMFSSPTLSLALTNIDGLGAGEMIPADVRRRNREEEAAESRSGSENMVDGGSGEEVEGGGGGGRKKRKKRYHRHSAEQIQELEAMFKECPHPDEKQRLELSRRLSLETKQVKFWFQNRRTQMKTQLERHENTLLRQENEKLRAENMAIREAMRDPICSNCGGPAIIGEISIEEQQLRIENARLKDELDRVCALAGKFLGRAAVPVSPPLASSSCLEEYGGGGTMMMERCVYLEMGLAAMDEVVKMANEEEPLWVREKLNEEEYLRMFSGIKHINNGFVSEASRQTALVFLNTSALLDTLMDPDRWVDMFPNLVATASIADIISGGLGGTRNGALQLMHAELQILSPMVPVRQLSFLRFCKQHAEGVWAIVDVSIDPVTDTSSSPSCRRLPSGCLIHDMTNGYSKVTWVEHSEYDESYIHELYRPLIRSGLGFGAQRWIAALQRQSECLAILSTPLDHSGISANGRRNMVKLAQRMTANFCAGVCASTVYKWNKLNTRNNNVGEDVKVMTRKSVEDPGEPPGTVLSAATSVWVAAAVERVFEFLRDERLRSEWDILSNGGPMQEMLRIPKSQHRHHPNAVSLLRATSLNPNQSSMLILQETCTDASGSLVVYAPVDIPAMQAVMNGGDSAYVALLPSGFAVVPAEEDGGGGRGSLLTVAFQILVNSLPTDKLTVESVETVNNLISCTVQKIRNALRCHEPST 738
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6914657 6921003 - XM_039049179.1 Bhi01g00412 23185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00412 738 SUPERFAMILY Bet v1-like 265 484 - -
Bhi01g00412 738 ProSitePatterns 'Homeobox' domain signature. 137 160 IPR017970 GO:0000981|GO:0006355
Bhi01g00412 738 MobiDBLite consensus disorder prediction 63 79 - -
Bhi01g00412 738 Coils Coil 203 223 - -
Bhi01g00412 738 SMART START_1 270 484 IPR002913 GO:0008289
Bhi01g00412 738 Pfam Homeodomain 105 160 IPR001356 GO:0003677
Bhi01g00412 738 CDD START_ArGLABRA2_like 269 483 - -
Bhi01g00412 738 Coils Coil 156 191 - -
Bhi01g00412 738 Pfam START domain 273 483 IPR002913 GO:0008289
Bhi01g00412 738 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 58 253 IPR042160 -
Bhi01g00412 738 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 262 732 IPR042160 -
Bhi01g00412 738 SUPERFAMILY Homeodomain-like 92 162 IPR009057 -
Bhi01g00412 738 SUPERFAMILY Bet v1-like 502 721 - -
Bhi01g00412 738 CDD homeodomain 109 162 IPR001356 GO:0003677
Bhi01g00412 738 ProSiteProfiles START domain profile. 261 487 IPR002913 GO:0008289
Bhi01g00412 738 SMART HOX_1 103 166 IPR001356 GO:0003677
Bhi01g00412 738 Gene3D - 80 161 - -
Bhi01g00412 738 ProSiteProfiles 'Homeobox' domain profile. 102 162 IPR001356 GO:0003677
Bhi01g00412 738 MobiDBLite consensus disorder prediction 63 112 - -
Bhi01g00412 738 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 262 732 - -
Bhi01g00412 738 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 58 253 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00409 Bhi-Chr1:6914657 Bhi01g00412 Bhi-Chr1:6914657 0 dispersed
Bhi01g00410 Bhi-Chr1:6914657 Bhi01g00412 Bhi-Chr1:6914657 0 dispersed
Bhi01g00412 Bhi-Chr1:6914657 Bhi01g01346 Bhi-Chr1:27104562 0 dispersed
Bhi01g00411 Bhi-Chr1:6914657 Bhi01g00412 Bhi-Chr1:6914657 0 tandem
Bhi01g00412 Bhi-Chr1:6914657 Bhi01g00413 Bhi-Chr1:6914657 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
41 PF01852 START 3.60E-47 CL0209 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00412 K09338 - csv:101222248 919.842