Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00413 TTATATTTCATATTGGTCTTTATAATTTTGTTTTATATTTAATGTTGCGTACAAATTTGTTTGGTGAAAATATTGCAGAGAGTGTAGAGATTTGTGTTTTAAGCTTACATACAATGGGGAATGGATGATTGGCATAAGTTTCCACTCTTCACCGATTCCATCTCAATCTCCGGTTTCTTCATGAGTTTTCTACCACGGTTCCACTCTAGAGGCGGCGGCGGCGGCGATAGTCTTATGGCCTCTGGTGCTATTGCTCAGCCACATCTTGTTACTCAATCTTCTTTCGCCAAATCAATGTTCTCTTCCCCCACGCTCTCTCTCGCTCTCACGAATATCGATGGGCTCGGCGCCGGGGAGATGATTCCAGCGGATGTTAGGAGGAGGAATAGAGAGGAAGAGGCAGCGGAGAGTAGATCTGGGAGCGAGAACATGGTGGACGGTGGTTCCGGCGAGGAAGTGGAGGGCGGCGGCGGTGGTGGTAGGAAGAAGAGGAAAAAACGGTACCACCGTCACAGTGCGGAACAGATTCAAGAACTGGAAGCTATGTTCAAAGAATGTCCTCATCCTGATGAAAAACAACGATTGGAGCTCAGTAGAAGACTCTCTTTAGAAACTAAACAAGTTAAATTCTGGTTTCAAAATCGTCGAACTCAAATGAAGACACAGTTGGAACGCCATGAGAACACATTACTAAGACAAGAGAATGAGAAGCTCCGTGCAGAGAACATGGCAATTCGAGAGGCCATGAGGGATCCAATCTGCTCCAACTGCGGCGGACCGGCCATCATCGGAGAGATCTCCATCGAAGAACAGCAACTCCGAATTGAAAACGCAAGATTAAAGGACGAATTGGATCGGGTGTGTGCCCTGGCTGGAAAATTCCTGGGACGGGCAGCGGTTCCGGTATCGCCACCATTGGCATCGAGCTCGTGTTTGGAGGAATATGGAGGTGGTGGAACGATGATGATGGAGAGATGTGTGTATTTGGAGATGGGTTTAGCAGCCATGGATGAGGTTGTGAAAATGGCAAATGAGGAAGAGCCATTGTGGGTTAGAGAGAAACTGAATGAAGAAGAATATTTGAGAATGTTCAGTGGGATTAAACACATTAATAATGGGTTTGTTTCTGAGGCTTCTAGACAAACTGCTCTTGTCTTCCTCAACACTTCTGCTCTCCTTGACACTCTCATGGATCCTGACCGGTGGGTGGACATGTTTCCGAACTTGGTCGCGACGGCTAGCATCGCCGACATAATCTCCGGCGGTCTCGGAGGAACCCGGAACGGCGCTCTTCAACTGGTTACTTGGGTTGAGCATTCGGAGTACGATGAAAGCTATATTCACGAGCTGTATCGGCCCCTGATTCGCTCCGGCCTTGGCTTTGGTGCGCAACGGTGGATCGCCGCCCTCCAACGCCAATCCGAGTGCCTTGCCATCCTCTCCACCCCTCTAGACCATTCTGGAATATCAGCAAATGGACGGCGGAATATGGTGAAGCTAGCGCAACGGATGACGGCAAATTTTTGTGCAGGAGTATGCGCGTCTACAGTGTACAAGTGGAACAAACTGAACACGAGGAATAACAACGTTGGAGAAGATGTGAAAGTGATGACGAGGAAGAGCGTGGAGGATCCCGGGGAGCCGCCGGGCACGGTGCTGAGTGCAGCGACGTCGGTGTGGGTGGCGGCCGCGGTGGAGAGAGTGTTTGAGTTTCTTCGTGATGAGCGGCTGAGGAGTGAGTGGGACATCCTGTCCAACGGCGGTCCCATGCAGGAAATGCTTCGTATCCCCAAATCACAACACCGTCACCATCCCAACGCCGTCTCGCTCCTCCGTGCCACCTCTCTAAATCCAAACCAGAGCAGCATGTTAATTCTACAAGAGACTTGCACCGATGCATCGGGGTCGCTTGTAGTGTACGCGCCGGTGGATATTCCGGCAATGCAGGCGGTGATGAACGGCGGGGATTCAGCCTACGTGGCATTACTACCGTCGGGGTTCGCGGTGGTGCCGGCAGAGGAGGATGGTGGCGGTGGCAGAGGGAGTTTGTTGACGGTGGCGTTTCAGATATTGGTGAATAGTTTGCCGACGGATAAGCTGACGGTGGAGTCGGTGGAGACGGTGAATAATTTGATTTCGTGTACGGTGCAAAAAATTAGAAACGCTCTCCGCTGTCACGAGCCTTCCACGTGACCCCCACCAAAGGATCTCTTCGATTTCGACCCGACGGCGACTCACCCTGCTGTGGTTTCCATTTTACCCCTCTCACCTTGAAGTTTGTGTAAGTTTTTTTTCAAAAAAAAAAAATCTTAAATTTTGTCATTTGTTTAAAATATATATTAGTTAAATTGCAAATATGGTCCCTACCGTTTCGAGAAAGTTAGAATATAGTCATGTGATTTTTAATTATAATTTAGTTATATAGTTTGATGATTTTTTCATAAATAGTCAAATAATACGACTATTTATAAGATTTTATCAAACTGTAAAAATTAAATTCTAACTTTTAAAACCATAAGAGCTAAATTCTAACATTTTATAAATTATAGGGATCAAATTTGCAATTTAACTTAAATATATCTAGTTTTTCAAAAATTTCAATATTACCTTTAGTCTTTCATAAATATTCCAAAGTTAACTTGGAGTAAAATTTTTCTTCATTATTTTTGGATGAATAGTGAGACATCTATAACGGTGATTTAAGACGATGTAATGATGTTCATGTCTCACTCCTCCTCCAACATTCAATGATGCGATGATGTTCATATGAGAATTTTGAAACCTTTATAAAAAGATCAAAGGTAATATTGCAATTTTTGAAAAAATAAAGTTATTTTTTTTTAAACAAATGAACAATTCAAGGATTTTTTTAATTATATAAATTGTTTATGATTATTATTACTTTAGAGGTAGATATGTTGAGAAAAATGTGAGGGTGGTATTGAGTCAAGAACGAACCGCCAATGTGTTGAGTATGACTCGGTGGGTGGGTTCGGGTATTGACTCTGGTCGACTCTCGTGTTGACTCATTTATCTAATTATGATATTTATTTTTATTGATAATTTGTTTTGTGGTTAGTCTGATTTAACCTGATTATATAATTTCAATGTATATTCTTTTAATATCATTCAAAAAA 3137 43.77 MDDWHKFPLFTDSISISGFFMSFLPRFHSRGGGGGDSLMASGAIAQPHLVTQSSFAKSMFSSPTLSLALTNIDGLGAGEMIPADVRRRNREEEAAESRSGSENMVDGGSGEEVEGGGGGGRKKRKKRYHRHSAEQIQELEAMFKECPHPDEKQRLELSRRLSLETKQVKFWFQNRRTQMKTQLERHENTLLRQENEKLRAENMAIREAMRDPICSNCGGPAIIGEISIEEQQLRIENARLKDELDRVCALAGKFLGRAAVPVSPPLASSSCLEEYGGGGTMMMERCVYLEMGLAAMDEVVKMANEEEPLWVREKLNEEEYLRMFSGIKHINNGFVSEASRQTALVFLNTSALLDTLMDPDRWVDMFPNLVATASIADIISGGLGGTRNGALQLVTWVEHSEYDESYIHELYRPLIRSGLGFGAQRWIAALQRQSECLAILSTPLDHSGISANGRRNMVKLAQRMTANFCAGVCASTVYKWNKLNTRNNNVGEDVKVMTRKSVEDPGEPPGTVLSAATSVWVAAAVERVFEFLRDERLRSEWDILSNGGPMQEMLRIPKSQHRHHPNAVSLLRATSLNPNQSSMLILQETCTDASGSLVVYAPVDIPAMQAVMNGGDSAYVALLPSGFAVVPAEEDGGGGRGSLLTVAFQILVNSLPTDKLTVESVETVNNLISCTVQKIRNALRCHEPST 690
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6914657 6925011 - XM_039049259.1 Bhi01g00413 23186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00413 690 SMART HOX_1 123 186 IPR001356 GO:0003677
Bhi01g00413 690 Pfam START domain 293 389 IPR002913 GO:0008289
Bhi01g00413 690 Pfam START domain 394 435 IPR002913 GO:0008289
Bhi01g00413 690 MobiDBLite consensus disorder prediction 83 99 - -
Bhi01g00413 690 Coils Coil 223 243 - -
Bhi01g00413 690 SUPERFAMILY Bet v1-like 290 383 - -
Bhi01g00413 690 Coils Coil 176 211 - -
Bhi01g00413 690 ProSiteProfiles 'Homeobox' domain profile. 122 182 IPR001356 GO:0003677
Bhi01g00413 690 SUPERFAMILY Bet v1-like 454 673 - -
Bhi01g00413 690 ProSiteProfiles START domain profile. 394 439 IPR002913 GO:0008289
Bhi01g00413 690 SUPERFAMILY Homeodomain-like 112 182 IPR009057 -
Bhi01g00413 690 CDD homeodomain 129 182 IPR001356 GO:0003677
Bhi01g00413 690 ProSitePatterns 'Homeobox' domain signature. 157 180 IPR017970 GO:0000981|GO:0006355
Bhi01g00413 690 Gene3D - 100 181 - -
Bhi01g00413 690 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 282 394 IPR042160 -
Bhi01g00413 690 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 76 273 IPR042160 -
Bhi01g00413 690 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 394 684 IPR042160 -
Bhi01g00413 690 Pfam Homeodomain 125 180 IPR001356 GO:0003677
Bhi01g00413 690 ProSiteProfiles START domain profile. 281 386 IPR002913 GO:0008289
Bhi01g00413 690 MobiDBLite consensus disorder prediction 83 132 - -
Bhi01g00413 690 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 282 394 - -
Bhi01g00413 690 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 76 273 - -
Bhi01g00413 690 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG1 394 684 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00411 Bhi-Chr1:6914657 Bhi01g00413 Bhi-Chr1:6914657 0 dispersed
Bhi01g00413 Bhi-Chr1:6914657 Bhi10g01447 Bhi-Chr10:34590065 8.77E-164 dispersed
Bhi01g00412 Bhi-Chr1:6914657 Bhi01g00413 Bhi-Chr1:6914657 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
42 PF01852 START 9.60E-07 CL0209 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00413 K09338 - thj:104817016 591.652