Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00441 TTCATTCTCTATTTCTCTCTCTCTTTCTCTCTGCGAGAAAACGTTTTCCCCTTTTTGAAGAGCCCTTTTTCCCCCCCCCCGAGAGATAATGCAGAGGATTCAAGCTGCGGTTTTCGCCATCGAAGTTAGTTGAAGCTCAAGCTTCAGTCTAGGTATCCAGTTCGAGCTGTATCTGTAACATGGGAACTAGTGAAGAGGCGAAGTCTGTGAAGACTGAAAAACCATCCTCACCAACGCCGGATCAGAACAATGTGCCTAATTCAGCCAGTATTCATGTTTTTCCTGAGTGGGCAGCCATGCAGGCATATTATGGTCCTAGAGTTGCGGTTCCACCATACTACAACTCTGCTGTGGCTTCAGGTCATGCTCCTCACCCTTATATGTGGGGTCCACCACAGATGATTCCTCCATATGGTACTCCTTATGCAGCAATCTATTCTCATGGAGGTGTTTATGCACATCCTGCAGTTTCTATGGGACCACATTCACACGGCCCTGGTGTTCCCTCTTCACCTGCGGCTGCAACTCCTTTGAGTATTGAAACACCTTCAAAGGTATCTGGAAATAGCAGTCAAGGTTTAATGAAGAAACTGAAAGGTTTCGATGGCCTGGCAATGTCCATAGGCAATGTTAGCACTGAGAGTGCTGAAGGGGGAGCTGAACATGGACAATCAGAGAGTATGGAAACTGAAGGTTCCAGTGATGGAAGTGATGGAACTACTGCCGGGGCAAATCAAACCAAAAGAAAACGAAGCCGTGAGGGAACACCTACCGCTGGTAAGGATGCAAAAATTGAGCCACAGGCAAGTCCAGTTACTGCTGCTGAGATGAATGAAAGCTCTAGCAAGTTATTGGGCACGACCAAAGCAGCTAATGCGACTGGAAAACTTGCATCTGTGATTTCTCCTGGAATGTCTACTGCCTTGGAACTGAGGAATCCTTCCAGCATAAACGCCATGACAAGTCCAACTACCGTTCCGCCCTGTTCAGTATTGCCTTCTGAAGTCTGGCTCCAGAATGAAAAAGAACTAAAACGGGAGAGGAGAAAACAGTCAAATAGAGAATCCGCTAGGAGGTCAAGGTTGAGGAAGCAGGCTGAGACGGAAGAACTAGCTCGTAAAGTTGATTCACTGACTGCAGAGAATGTTGCTATTCGATCTGAAATAAGTAGATTGTCGGAGAATTCCGAGAAACTTAAGAAAGAAAACTCCACATTGATGGAAAAGCTTAAAAGCGTTCAATCAGGACGAACAGAAGCATTAGACATGAATGAAAAGAGGATGCAACAACCTATAAGCACAGAAATCAAAGGACCTGTGAATAAAAGCATTAACGAAGAGAGTATCATCTGCAAGAAAAACTCGAGTTCGGGTGCAAAACTGCGCCAGCTCTTGGACACGAGTCCGAGGGCCGATGCAGTTGCTGCTAGCTAAAAGAACCAGTTTCATTGCAGTTTGTTTTTTCTGTGGTTTTGGCATATTACAAGCCCAAAATTACTGCTAACAAAAATTACAAAGAATGAGAAAACAACTGAATAGGATTATGTCTGTGAGAAAGGGCAGGCTCTAATTTTAATGGTTAGTTACTTGAATAGTTGTATTATTATGTGTAACTATAAAGAACATTGGGGTTGGCAACTGTTACAATTTGATGTAATCGTTGGAGATTAGAGATTTTTAGCTTTAGATCTCTATGAGCACCTCGTGCCAGATGATAAATCATCAATTTCCGGGTTGAAAGTTGAACCCTTTTATGTATTGTCAATGAAAATTGAACCATTAACTTGTGATTAAATTGTAATCGGTGATCTACTTTTGATTA 1821 43.11 MGTSEEAKSVKTEKPSSPTPDQNNVPNSASIHVFPEWAAMQAYYGPRVAVPPYYNSAVASGHAPHPYMWGPPQMIPPYGTPYAAIYSHGGVYAHPAVSMGPHSHGPGVPSSPAAATPLSIETPSKVSGNSSQGLMKKLKGFDGLAMSIGNVSTESAEGGAEHGQSESMETEGSSDGSDGTTAGANQTKRKRSREGTPTAGKDAKIEPQASPVTAAEMNESSSKLLGTTKAANATGKLASVISPGMSTALELRNPSSINAMTSPTTVPPCSVLPSEVWLQNEKELKRERRKQSNRESARRSRLRKQAETEELARKVDSLTAENVAIRSEISRLSENSEKLKKENSTLMEKLKSVQSGRTEALDMNEKRMQQPISTEIKGPVNKSINEESIICKKNSSSGAKLRQLLDTSPRADAVAAS 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7530748 7536394 - XM_039043273.1 Bhi01g00441 23214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00441 417 SMART brlzneu 281 345 IPR004827 GO:0003700|GO:0006355
Bhi01g00441 417 MobiDBLite consensus disorder prediction 115 133 - -
Bhi01g00441 417 Pfam G-box binding protein MFMR 1 97 IPR012900 -
Bhi01g00441 417 Pfam bZIP transcription factor 281 343 IPR004827 GO:0003700|GO:0006355
Bhi01g00441 417 MobiDBLite consensus disorder prediction 13 28 - -
Bhi01g00441 417 MobiDBLite consensus disorder prediction 395 417 - -
Bhi01g00441 417 MobiDBLite consensus disorder prediction 1 28 - -
Bhi01g00441 417 MobiDBLite consensus disorder prediction 351 380 - -
Bhi01g00441 417 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 417 IPR044827 GO:0003700|GO:0006355|GO:0043565
Bhi01g00441 417 Gene3D - 284 357 - -
Bhi01g00441 417 SUPERFAMILY Leucine zipper domain 284 340 IPR046347 GO:0003700|GO:0006355
Bhi01g00441 417 MobiDBLite consensus disorder prediction 153 227 - -
Bhi01g00441 417 MobiDBLite consensus disorder prediction 101 133 - -
Bhi01g00441 417 MobiDBLite consensus disorder prediction 282 312 - -
Bhi01g00441 417 Pfam Disordered region downstream of MFMR 132 263 - -
Bhi01g00441 417 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 283 346 IPR004827 GO:0003700|GO:0006355
Bhi01g00441 417 MobiDBLite consensus disorder prediction 153 186 - -
Bhi01g00441 417 PANTHER G-BOX-BINDING FACTOR 3 1 417 - -
Bhi01g00441 417 Coils Coil 301 349 - -
Bhi01g00441 417 MobiDBLite consensus disorder prediction 213 227 - -
Bhi01g00441 417 CDD bZIP_plant_GBF1 286 334 IPR045314 GO:0003700|GO:0006355
Bhi01g00441 417 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 288 303 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00441 Bhi-Chr1:7530748 Bhi03g01271 Bhi-Chr3:26322562 3.15E-51 dispersed
Bhi01g00440 Bhi-Chr1:7530748 Bhi01g00441 Bhi-Chr1:7530748 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
45 PF16596 MFMR_assoc 3.20E-21 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00441 K09060 - csv:101213720 739.569