Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00468 CAGCACCAGAGAAACCAGACTAAGCCAGCACATACACTACCATCAGAGGCAGAGTTTAGCCCCACATTTTGGATATTGATGTCCAAGTTTATGGGTTCCCAGATACCAAAATCTGTAAGGTTTGGACATCCAACTTCTAATTTTCATGGCAGATATGGAGGTTACCAATATAGAAGCAGACTGTCTCCGGGGTCAATATTGGAAAGCATAGAGAGAAGATTTTCAAGTGTTTCTGATAGCTTTAGAAGAATAATTACAGGCTTAGGCTTCAAGCATTCAGGTGATCAGTCGGTAAAGAAACCAAAATTTTGGAAGAAAATTCTTGATCCAAATAAGCCATTTCTTCAGCAATGGAACAAGATATTTGTGCTCTCCTCTGTCATAGCAGTAGCCGTGGATACTCTTTTCTTTTTCATCCCAGTGATCGATGAAAAACGTTATTGCCTAACCGTGGACCGACAACTTATGATCATTGCTTGTGTTCTTCGTTCATTCATCGACTTATTTTATCTACTTCACATGATCTTTGAATTTCGAACCGGCTTTCTTCCCCCTTCTTTACCGGTTTTTGGAAGTGGTGAATTGATCAAAGATCCAGTAGATATAGCAAAGAAATATATCTTCTCAAACTTCTTGATCGATATCTTATCCATTCTCCCACTGCCTCAGCTTTTGGTATTTGCAATCGTAACTGCAACGAAAGGCCCGATTCCATTGAAGACAAAGGATGTCGTGAAGATTGCAGTTATTTTGCAATATATTCCAAGACTTCTCCGAATTTATCCACTATATAGAGAAGTAACCAGAACTTCTGGCATACTGACAGAAACAGCTTGGAGTGGAGCTGCCTTCAATCTCCTCATTTATATACAAGCTAGTAATGTAGTTGGTGCCATTTGGTATTTGTTATCAATCGAACGACAAGCAAAATGTTGGTTCGAGAAATGCATGGAAGATTGCTTCAACAATTGCAAGGAAGATTGCTTCAACAAATGCAAGGAAAATAACTGTATCCACAATTTTCTGTACTGTGGAGATCAAAGAGGACAAGTATACTCGTCTATAAATCAGTTCTGCTGTCCTAAGAAGTTCGAAGATGGCAAGAATTTCGAATTTGGGATGTTTGGTAAAGCCCTTGAGTTTCAATTAACAACAACAATGAACTTTTTCCGGAAATTATTCTATTCCTTCTGGTGGGCTCTGCAAAATGTCAGCTCTAGTGGACAAAACCTTAAAGTAAGCAAGTACATGGGGGAGGTTTTTTTTGCTGTCTTCATTGCCACCCTTGGTTTGGTTTTATTTGCGCTTCTCATTAGCAATATTCAGAAATATCTGCAATCTGCAACAGTTAAAATAGAGCAGATGAGAATCAACCGAAGAGACGCTGAGCATTGGATGGCACATCGTATGCTCCCAGAGGAGTTGAGGCAACGTATTCGACGATATGATCAATACAAATGGCAGCTAAATAGGGGAGTTAAGGAAGAGGAACTCATCAGTAACCTTCCTAAAGACCTCAGGAGGGACATCAAACACCACCTTTGCTTGGCCCATCTTAAGAAAGTGCCATTTTTTAGCAGCATGGATAAACAACTGTTGGACTCGATGTGCGAATATCTCAAGCCTGTGTTATTCACAAAGAAGAGCTTCATTCTGCAAGAGGGTGACCCAATTGATATGATGCTATTTATCATGAAAGGACAGCTGGCTACTATTATTACTTGTGGTTGGAAAAATGACCCACTCTCGGCCACTCTCAACGCTGGCGAATTTTGTGGTGAAGAGCTAGTTCAATGGGCAATGGATCCCACCTCCACTTCTCTTCCCATTTCAAACAGAACAATTAAAACTCTAACTGAGGTTGAAGCCTTTGCTCTAACGGCTAATGAGTTGAAATTTGTAACTAGTCAATTCCACTTCCAGCGCCTCAATAGCAAGCAGTTCCAACTCTCAGTGAGGTTCTACTCTCATCAATGGAAAGTTTGGGCAGCCTACAAAATACAAGAAGCTTGGCACGATCACACCGAAAGAAAACGGAGGGGGGGTGGAGATGGTAGGTTTCAAGATGCATTAGCTAAAACAGTTGGCCCCTCGGTGAGCTTTAGCGCCACTCTGTATGCTTCCATATTCATATCCCATCTACTGCAAACTGTGCAGCGAGATCAATACCAGCAAACTCCCCAAGTCACACGAGTGATGAAGCTACCGGCTCCTCTGAAGCCAGACGATGAGCAAGACAAGCCAAACTTCACCATCTTGGATCTTTAAAATTTATTGTTTGAAGCTCTTTAACCTTCTATGTCCTGAGTTTTAGGTTCTTGGTTTTCTCTGTGTGATATGTGAATAATGTATGATAATCAAGAGAATGTTTTTCCTCTTGCTTGGTTTCATTTTTCATTTTCTCTAGCCTACTACTACCTAGTTTCTACCTTGCTGTAATGTTGGCATGCCATTAAATAGGAACTTAATGAAGCATCATCATCATCAAATTCCATTTCATGTAAAGTTTTTCCTGTTTGA 2520 40.48 MSKFMGSQIPKSVRFGHPTSNFHGRYGGYQYRSRLSPGSILESIERRFSSVSDSFRRIITGLGFKHSGDQSVKKPKFWKKILDPNKPFLQQWNKIFVLSSVIAVAVDTLFFFIPVIDEKRYCLTVDRQLMIIACVLRSFIDLFYLLHMIFEFRTGFLPPSLPVFGSGELIKDPVDIAKKYIFSNFLIDILSILPLPQLLVFAIVTATKGPIPLKTKDVVKIAVILQYIPRLLRIYPLYREVTRTSGILTETAWSGAAFNLLIYIQASNVVGAIWYLLSIERQAKCWFEKCMEDCFNNCKEDCFNKCKENNCIHNFLYCGDQRGQVYSSINQFCCPKKFEDGKNFEFGMFGKALEFQLTTTMNFFRKLFYSFWWALQNVSSSGQNLKVSKYMGEVFFAVFIATLGLVLFALLISNIQKYLQSATVKIEQMRINRRDAEHWMAHRMLPEELRQRIRRYDQYKWQLNRGVKEEELISNLPKDLRRDIKHHLCLAHLKKVPFFSSMDKQLLDSMCEYLKPVLFTKKSFILQEGDPIDMMLFIMKGQLATIITCGWKNDPLSATLNAGEFCGEELVQWAMDPTSTSLPISNRTIKTLTEVEAFALTANELKFVTSQFHFQRLNSKQFQLSVRFYSHQWKVWAAYKIQEAWHDHTERKRRGGGDGRFQDALAKTVGPSVSFSATLYASIFISHLLQTVQRDQYQQTPQVTRVMKLPAPLKPDDEQDKPNFTILDL 729
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8480910 8484932 + XM_039028492.1 Bhi01g00468 23241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00468 729 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1 47 716 - -
Bhi01g00468 729 SMART cnmp_10 498 627 IPR000595 -
Bhi01g00468 729 MobiDBLite consensus disorder prediction 711 729 - -
Bhi01g00468 729 Gene3D Helix hairpin bin 425 489 - -
Bhi01g00468 729 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 47 716 - -
Bhi01g00468 729 SUPERFAMILY cAMP-binding domain-like 428 612 IPR018490 -
Bhi01g00468 729 CDD CAP_ED 498 629 IPR000595 -
Bhi01g00468 729 SUPERFAMILY Voltage-gated potassium channels 84 420 - -
Bhi01g00468 729 MobiDBLite consensus disorder prediction 710 729 - -
Bhi01g00468 729 Pfam Ion transport protein 92 424 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bhi01g00468 729 Gene3D Jelly Rolls 496 613 IPR014710 -
Bhi01g00468 729 ProSiteProfiles cAMP/cGMP binding motif profile. 498 582 IPR000595 -
Bhi01g00468 729 Gene3D - 94 422 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00468 Bhi-Chr1:8480910 Bhi01g00470 Bhi-Chr1:8493865 0 dispersed
Bhi01g00468 Bhi-Chr1:8480910 Bhi01g00469 Bhi-Chr1:8481014 0 tandem
Bhi01g00468 Bhi-Chr1:8480910 Bhi01g01464 Bhi-Chr1:29960353 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00468 K05391 - csv:101206492 1142.49