Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00495 TTGCCGACTACTTCTCAAACTCCCAACCAAATATATCCAATCCGGGTGGAACCATGGTTAATATTTGACTCATCGTATATTGATAATAGTTAACCATGGTTAAAGGGATTGCTCGTGTAGAATAAGGAGGAGCGGCAGCAAGACAGGAGGAAGAAAAGAAAATCCATTTCCCATTTGTCTCGCCTTTCTCGTTTTCGTTTTCGTTTTCCATCTTCGTATTCTTTTTCACTTCACCGTTCTGGAAAACAGAGAAAGAAAAGAGGGTATTGCTTTATTTATTTTTTCTTTTCTTTTTTTTCTTTCTTTCTTTCGTTTATTTTGTCGCGTGAAATAACTGCTTGTTTGTTTTCCAAGAAAAAAAATCTTTTCTCCTCGATTCAGGCTGTCGCTTTCCTGGGAATGTTTATAGCCTTCCAAGTTTCTTTCTCTCTTCCCTTATCTCACCATCTTCTTTTCAGCACATTTCGCATGCCCAGTACCGGATTAATTCTGTTGGGGGTATTTGATAATGGTTTGAGGAATTCTTGAGTTCTTGGACTTGGATTTTGATCTGGGGTTTTGTAATTTTGAAGCGTGTGTGTGAGATTGAGATTGTGTTTTGGTTTTGGAGGGTTTAGAGATGAAGATTGAAGATGGGTTGCGGAGTGTTGGTGGGAAGGATGAGGATAAGACTGTGGTTGCTGCTGTTTTGGGAACGCGGGCTTTTAATTACTTGATGACTTGCTCTGTTTCGAATGAGAATCTGTTTATGGCGGTGAGGAATGATGAGAATTTGCAGAACAAGCTATCGGATCTGGTTGAGAGACCCAATGCTTCCAATTTCAGCTGGAACTACGCAATTTTCTGGCAACTTTCTCATTCTAAATCTGGTGAATGGGTTTTGGGATGGGGAGATGGATCGTGTAGAGATCCTAGGGATGGAGACGAAACAGATTCTACACAGATTCTTAGTCTCCGGCTTGAAGATGAGAGCCAACAGAGGATGAAGAAAAGAGCACTGCAGAAGCTTCACACACTCTTTGGAGGCTCTGATGAGGATAATTATGCTCTTGGATTAGACAGAGTTACTGATACTGAGATGTTTTTTCTTGCTTCAATGTATTTCTCATTCCCTCGTGGAGATGGGGGCCCTGGGAAGTGTTTGGCGTCCGGGAAACATATCTGGCTTTCGGATGTGCTCAATTCGCCATCTGAGTATTGTGTGAGATCATATCTGGCAAAATCTGCGGGAATTCGGACGATTGTTTTGGTGCCGACTGATGTTGGAGTAGTTGAATTGGGTTCTGTGAGATCCGTGAATGAGAGCTTAGAGTTAGTGCAGCTGATCAGTTCACTGTTTTCATCCCAACTTTCACTCGACAGAGTTAGGTCGTCAGCAGCGACATTGATGATGGCTGAAAGAAAAGATGAAAACACCCCATTTTCGGGTTTGGGAATTGCAGAAAGAGGAGAAGGAGGAGGGGGGATTCCTAAGGTTTTTGGGCAGACTTTGAACTCGGGGAACATGGGTCGATCTCATTTTAGAGAGAAACTGGCGATTAGGAAGATGGATGAGAGGTCATGGGAAGCATGTGCCAATGGAGGTAGAATTCAGTTTCAAAGCCCTCGAAATGGCATTTGCAGTCCGAGTTTGGCACATGTTCATGGTCTCAAGCAGGGGAATCCTGCAGAAATTTATGGCTCTCCAACTCTGCCGGTAAATAATAATCACGAGCAGCTAGTCAATGGAGTCAGAGACGAATTTTGTCTCAACCCATATCAATCACAAAAGCTGGCCCAAATGAAAATTGATTTCTCTGTAGCAACTTCAAGGCCTTCTGTGATTAACCGTGTAGGAGCAGATTCGGAGCATTCAGATGTAGAGCCTCAATGCAAAGAAGAGGGGCCTGGCACTGATGAAAGACGACCTCGCAAACGAGGCAGAAAGCCTGCAAATGGCAGGGAGGAACCACTAAATCATGTTGAGGCAGAGAGGCAGCGGCGTGAAAAGTTGAACCAGCGGTTCTATGCTCTACGAGCTGTTGTGCCCAATATCTCCAAAATGGACAAAGCTTCACTGTTGGGAGATGCCATTGCTTACATTAACGAGCTTCAAGAAAAAGTGAAGGCCATGGAATTTGAACGTGAGAAATCCAGCCTCACCTCAAGTGAGGCAACCCCTTCAGAGGGGAACCCAGAAATTGAAAATAAAGATCAATTCCTTGACGTCGACATTGACGTCGAGGCTGCTCATGATGAAGTCATTGTGAAGGTTAGCTGCCCATTAGACTCACACCCTGCGTCAAGAGTTATCAAGGCAATGAAAGATGCTCAGATCAATGTTGTTGATTCAAAACTCTCTGAAGCAAATGATAAAGTTTTGCACACATTTGTCATCAAGTCTCCCGTATCTGAGCAGTTGACGAAGGAGCAGTTGATAGCCGCATTTTCCCGGGACTCCACTTCGTTACATCCTCTATCGACAGTTGGGTAGCACAACAACTACAGTAACATAGTGCATACATAGGTTTGTCCGTATGTAGTGAGAAGAGCCCAACTGAAAGCTTCTTCAGAAGTTTTGATTTACAACAGGTATTATTCTTACAGGAATTACAGTTCCAGTGAGAAGTAGGCAGATAACTATTTATTATTAACCAAGTAGGAGAGCAGAATTTATGTTGTTTATAGTACACATTGTTATTATTATTACTATTATGTCATAATGAAGTATTCTTGCAAGATGATCTAGATCTCTGTAAGTTATTAGGGAGTTTTTCTATTGGGTCTAGTCAACTGTTCTTTTGGGTTATTCAGAGTCCTCTAAACTGTCTACGTTCTTTTTAATGTGAACTCCTCAAATTCTTTTGTTCTTTACTCTCTATTTACCATCAAACAATATCAGTATCATTATCTGTTCATTATTTTTATGAAAAGGGATACTTCATTACAA 2929 41.96 MKIEDGLRSVGGKDEDKTVVAAVLGTRAFNYLMTCSVSNENLFMAVRNDENLQNKLSDLVERPNASNFSWNYAIFWQLSHSKSGEWVLGWGDGSCRDPRDGDETDSTQILSLRLEDESQQRMKKRALQKLHTLFGGSDEDNYALGLDRVTDTEMFFLASMYFSFPRGDGGPGKCLASGKHIWLSDVLNSPSEYCVRSYLAKSAGIRTIVLVPTDVGVVELGSVRSVNESLELVQLISSLFSSQLSLDRVRSSAATLMMAERKDENTPFSGLGIAERGEGGGGIPKVFGQTLNSGNMGRSHFREKLAIRKMDERSWEACANGGRIQFQSPRNGICSPSLAHVHGLKQGNPAEIYGSPTLPVNNNHEQLVNGVRDEFCLNPYQSQKLAQMKIDFSVATSRPSVINRVGADSEHSDVEPQCKEEGPGTDERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQEKVKAMEFEREKSSLTSSEATPSEGNPEIENKDQFLDVDIDVEAAHDEVIVKVSCPLDSHPASRVIKAMKDAQINVVDSKLSEANDKVLHTFVIKSPVSEQLTKEQLIAAFSRDSTSLHPLSTVG 617
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8906640 8909730 - XM_039028478.1 Bhi01g00495 23268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00495 617 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 445 505 IPR036638 GO:0046983
Bhi01g00495 617 CDD bHLH_AtAIB_like 439 512 - -
Bhi01g00495 617 Coils Coil 488 508 - -
Bhi01g00495 617 MobiDBLite consensus disorder prediction 404 453 - -
Bhi01g00495 617 MobiDBLite consensus disorder prediction 408 453 - -
Bhi01g00495 617 Gene3D - 435 507 IPR036638 GO:0046983
Bhi01g00495 617 MobiDBLite consensus disorder prediction 501 522 - -
Bhi01g00495 617 PANTHER TRANSCRIPTION FACTOR MTB1 13 611 - -
Bhi01g00495 617 PANTHER MYC 13 611 IPR045084 GO:0003700|GO:0006355
Bhi01g00495 617 SMART finulus 448 497 IPR011598 GO:0046983
Bhi01g00495 617 Pfam Helix-loop-helix DNA-binding domain 446 492 IPR011598 GO:0046983
Bhi01g00495 617 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 52 240 IPR025610 -
Bhi01g00495 617 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 442 491 IPR011598 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00495 Bhi-Chr1:8906640 Bhi05g00260 Bhi-Chr5:4932867 2.76E-93 dispersed
Bhi12g01850 Bhi-Chr12:59306808 Bhi01g00495 Bhi-Chr1:8906640 1.07E-17 dispersed
Bhi12g01851 Bhi-Chr12:59307204 Bhi01g00495 Bhi-Chr1:8906640 1.03E-17 dispersed
Bhi01g00495 Bhi-Chr1:8906640 Bhi11g00156 Bhi-Chr11:3623455 5.80E-26 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51 PF14215 bHLH-MYC_N 2.20E-53 CL0161 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00495 - - csv:101208845 1140.95