Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00538 AGCAGAGCCACGGAAGATTCAACATTCTGTGTGTTACCATCCAAAATTGCAATGGCAAATTGCCAAAACGCCAAAGCATTAGGAACGAAACGAAGGACCCACCTTATCCAATTCGGCCTTTCTTCCTCTTTCCTCCATTTCGTTACTGTCTTCTTCTCTTCCAAGTTCAATTCCAAATCACCCATCCTTCTTTTTCTCATCTAATCAAAACAACTAACAAACAAACAATTTCCCTTTTCTGTCATTTCTTCCCTCAAGGATCGTTGGTTTTTGGGTGCTGGACAATGAACGTCAAAGCTCCGGCGACGAGGACTCGTGTTGGGAAGTACGAGCTCGGTAAAACCCTCGGCGAGGGCACTTTTGCTAAGGTTAAGTTCGCGAAGAACGTTGAGAATGGTGACTATGTCGCCATTAAGATTCTCGACCGGCAACAAGTTCTTCGCCACAGGATGGTCGAACAGATTAAAAGAGAGATTTCAACTCTGAAAGTGATCAAGCATCCGAACGTTTGTAAGATTTATGAGGTTATGGCAAGCAAATCAAAAATCTACATTGTTCTCGAGTTTGTGGATGGAGGCGAGCTCTTTGACAAGATAGCTGCAAATGGAAGGCTTAAAGAGGATGAGGCAAGGAAATTTTTCCATCAACTTATTAATGCTGTAGATTACTGCCATAGTAGAGGCGTGTACCATCGAGATCTGAAGCCTGAAAATCTTCTTCTGGATTCACATGATGTTCTTAAAGTGTCAGATTTTGGATTGAGTGCATTCTCGCAGCAAGTAAGGGGTGATGGTCTTCTTCATACTGCCTGTGGGACCCCAAACTACGTAGCTCCCGAGGTCTTCAAAGATAAAGGTTATGATGGTACATCATCAGATATTTGGTCATGCGGGGTCATTCTCTTTGTTCTTATGGCTGGCTTCTTGCCTTTTGACGAGCCAAATCTAATGTGTTTATATAGAAAAATTTCCAAGGCTGATTTCTGCTTTCCATCATGGTTCTCAAATGGTGCGAAAAAACTAGTTTCCCGCATTCTTGATCCAGACCCTACTACTCGAATAACGATAGCCGAAATTCAAGAAGATCCATGGTTCAAGAAGGGCTACACACCTGCTCATTTTGAAGTGGAAGAGGATATAACTCTCGATGATGTAGATGCTGCTTTTAGCAGCTCGAAGGAACATCTTGTGACCGAAAGAAAAGAGAAGCCAGTGTCCATGAATGCTTTTGAGCTTATCTCTAGGTCACCTGGTTTTAGTCTTGACAATCTATTTGAGAAGCAGAAGGCTGTTGCAAAGAGGGAAACCCGTTTTACTTCGCAAAGCTCTGCAAACGAGATCATGTCGAAGATTGAAGAAACTGCAAAACCGATGGGGTTCAATGTACGAAAACAGGACTACAAGATGAAGTTGCAAGGTGACAAGACTGGGAGGAAAGGACACCTCTCCATAGCTACTGAGGTGTTTGAGGTGGCTCCTTCCTTGCATATGGTCGAGCTTCGGAAAACAGGGGGCGATACGCTCGAGTTTCATAAGTTCTACAAAAGTTTCTCTTCAGGATTAAAAGACATAATGTGGAGAACTGATGGAAATACCGTAGAAGGGAGCTAATCTCTCTCCTCTTCATAACGCTGCTGTTATGAAGTTGATTCCTGAGATGCATTGCAGGTATTTCCTGTTGTCACATTACCGACGTCGAAACAAGAACTACACATAATAGAGAAGCTTAAGAAAATCTGTACTTTTTTCTTGTTTCTCAGAACTCATTAAATACAAAGTAATTGTACAAATAATCAAAGTTTCTGTAGTAAGAGAAGTGATTTCATGCAAGACTACATTTGCTTTTGCATGATTCAATTTCTTCAAATTCAAATAATCATAATTTCTGTTTAAATATACTCATTTAAGCCCATTTCTTCAA 1920 41.25 MNVKAPATRTRVGKYELGKTLGEGTFAKVKFAKNVENGDYVAIKILDRQQVLRHRMVEQIKREISTLKVIKHPNVCKIYEVMASKSKIYIVLEFVDGGELFDKIAANGRLKEDEARKFFHQLINAVDYCHSRGVYHRDLKPENLLLDSHDVLKVSDFGLSAFSQQVRGDGLLHTACGTPNYVAPEVFKDKGYDGTSSDIWSCGVILFVLMAGFLPFDEPNLMCLYRKISKADFCFPSWFSNGAKKLVSRILDPDPTTRITIAEIQEDPWFKKGYTPAHFEVEEDITLDDVDAAFSSSKEHLVTERKEKPVSMNAFELISRSPGFSLDNLFEKQKAVAKRETRFTSQSSANEIMSKIEETAKPMGFNVRKQDYKMKLQGDKTGRKGHLSIATEVFEVAPSLHMVELRKTGGDTLEFHKFYKSFSSGLKDIMWRTDGNTVEGS 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9783360 9791338 + XM_039022236.1 Bhi01g00538 23311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00538 441 CDD STKc_SnRK3 14 269 - -
Bhi01g00538 441 PANTHER - 7 434 - -
Bhi01g00538 441 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 7 434 - -
Bhi01g00538 441 Gene3D Phosphorylase Kinase; domain 1 4 94 - -
Bhi01g00538 441 CDD CIPK_C 313 428 - -
Bhi01g00538 441 Pfam Protein kinase domain 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi01g00538 441 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Bhi01g00538 441 Gene3D Transferase(Phosphotransferase) domain 1 95 276 - -
Bhi01g00538 441 ProSiteProfiles Protein kinase domain profile. 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi01g00538 441 ProSiteProfiles NAF domain profile. 307 331 IPR018451 GO:0007165
Bhi01g00538 441 SUPERFAMILY Protein kinase-like (PK-like) 12 298 IPR011009 -
Bhi01g00538 441 SMART serkin_6 15 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi01g00538 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Bhi01g00538 441 Gene3D Kinase associated domain 1, KA1 306 432 - -
Bhi01g00538 441 Pfam NAF domain 309 369 IPR004041 GO:0007165
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00538 Bhi-Chr1:9783360 Bhi08g02035 Bhi-Chr8:58659804 0 dispersed
Bhi01g00538 Bhi-Chr1:9783360 Bhi08g02033 Bhi-Chr8:58659791 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87284 PF00069 Pkinase 9.40E-72 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00538 - - csv:101203531 843.188