Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00563 CCTAAAAACATGAGGACCCCAATCCTTCTTTTGTACTCTTATTCTTTCTTTTCCTTCACACAACCAATACAGCCCATCCCATTTGAAAGCAAAGAAAAAAGAAAAGAAAAAAAGAAAGAGAGAAAAAAATATTGAAAAAATAGAAGTGTGCTGCTGTGTGAAAGTAAACATGAAAATGTGTTAATAAAATGAAAAGCCTCCCATTGTTGTGCCAAATTATACTTAAGACCACATTTAGCTTTTCTTCTCTCTCCATCATCAAATGGAACCATTTCTCAATTACATTGAAGCATCTGATGCTAAAGCAACCACCTTTTGCAACTCTGCTTCTATCACGACCTTCGAATACGAACAAGTTTCTGAGAAGCGAAAACAGAGGAGCACTCAAGAAAACAGAGACCACCCCATGTTCAGAGGAGTTCGAAAACGAAATTGGGGCAAATGGGTCTCTGAGATTCGTGAGCCGAGGAAGAAGACCAGAATTTGGCTTGGAACTTACCCAACGCCGGAAATGGCAGCCAGGGCACATGACGCCGCGGCGCTGGCAATTAAGGGTCAATCTGCTTTTCTCAATTTCCCTGAATTGGCACAATTCCTTCCTCGCCCGCTCTCCAAGTCCCACAAGGACATTCAGGCCGCCGCAGCACAGGCGGCGGCCGCCACATTTTCCGCGGGAAGCACTGGTGAAGGTGGAGGAGGGGAAGCGGAGGGGGAGAACAGGGAGCCTCTGTTTTCTGGAAGCGATGGGGGAGACAGAACAGAGGACTCCACAAACTCCCTGACGACGGCGGCCGGTGACGAGACATTGTTCGATTTGCCTGATTTGTTCGCCGGAAGTTCTGATTTGAAAGATGGGTTTGTTTATCATTCTTCATTGTGGCAGTTATGTGCGGCGGCCGATCATAATGGTTTTCGGCTGGAAGAGCCTTCATTCTGGGAGCTCATTTAAGTTAAATATGTGTCTTTATTTTCCACTCCATCAGAATTCTGTTTCCAGAGATGATGTATTTTTGTTCTACTGTAATAATGAAATGAATAACAGAGTAAAAACGTTTTGGAAATATTTAGTCTTCCTGTGAGATTAATCTGGTTAACATTTGTTTTTAAAGAAAAGGTGTAGTCCCTACTCTATAAATGTTGAGAAGATACTCACACTGTCTATTCTTGGATAGAAATTATTATTATTGTTGTTGTTTTAAGATTTATTGAATTTATAAAGACTAAAGTTTAGACATGGATTTGAAAGTTTAGACTAAAGTAATCAAATATTTTTCATTCAACATCTGACTATTGCAATAAATCCAAAAAAATCCTAATTTGATGA 1324 40.79 MEPFLNYIEASDAKATTFCNSASITTFEYEQVSEKRKQRSTQENRDHPMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDAAALAIKGQSAFLNFPELAQFLPRPLSKSHKDIQAAAAQAAAATFSAGSTGEGGGGEAEGENREPLFSGSDGGDRTEDSTNSLTTAAGDETLFDLPDLFAGSSDLKDGFVYHSSLWQLCAAADHNGFRLEEPSFWELI 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10181030 10182353 + XM_039046629.1 Bhi01g00563 23336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00563 228 ProSiteProfiles AP2/ERF domain profile. 49 106 IPR001471 GO:0003700|GO:0006355
Bhi01g00563 228 MobiDBLite consensus disorder prediction 163 177 - -
Bhi01g00563 228 Gene3D AP2/ERF domain 49 107 IPR036955 GO:0003700|GO:0006355
Bhi01g00563 228 SMART rav1_2 49 112 IPR001471 GO:0003700|GO:0006355
Bhi01g00563 228 CDD AP2 50 108 IPR001471 GO:0003700|GO:0006355
Bhi01g00563 228 Pfam AP2 domain 50 98 IPR001471 GO:0003700|GO:0006355
Bhi01g00563 228 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 31 226 - -
Bhi01g00563 228 MobiDBLite consensus disorder prediction 136 177 - -
Bhi01g00563 228 PANTHER ETHYLENE RESPONSE FACTOR 31 226 - -
Bhi01g00563 228 PRINTS Ethylene responsive element binding protein signature 50 61 IPR001471 GO:0003700|GO:0006355
Bhi01g00563 228 PRINTS Ethylene responsive element binding protein signature 72 88 IPR001471 GO:0003700|GO:0006355
Bhi01g00563 228 MobiDBLite consensus disorder prediction 30 50 - -
Bhi01g00563 228 SUPERFAMILY DNA-binding domain 49 107 IPR016177 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00563 Bhi-Chr1:10181030 Bhi06g02000 Bhi-Chr6:54954420 4.00E-41 dispersed
Bhi01g00563 Bhi-Chr1:10181030 Bhi04g00846 Bhi-Chr4:21311079 5.74E-42 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54 PF00847 AP2 1.00E-14 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00563 - - cmo:103483130 358.221