Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi01g00582 AGTTACAGTTAAATTTGCATAGCATATCTTAAATTAAAAATTGTAATGGGACATTTCCTTTTCTTTGTCGCCATTCTCTCTGTTTCAGTTACCCCTTCCTTTTGCTTTCATCCAAAATCCTTCAATGTTTCCAAGTATCAGTCCTATGACTTAGATTGGTCCTCGGCTGTGGCCACCTGGTATGGTCCCGCTGACGGTGCCGGAAGCGATGGAGGCTCGTGTGGGTATGGAAAAGCGGTGGAGCAACCGCCATTTTCGTCGTTAATTGCGGCGGGAGGCCCTTCTTTGTACAAATCTGGCAAAGCTTGTGGAGCTTGTTATCAGGTGAAGTGCTCTGGAGAAGGCGCGTGCTCAGGGAATCCAGTGACGGTGGTTATAACTGATAGTTGTCCCGGCGGCTCCTGTGCTTCTGACTCCGTCCACTTTGACCTAAGCGGCACTGCTTTTGGTGCTATGGCTGCAACTGGCCGGGCCGATGAACTTCGCAGTCTCGGTGTTTTGCACATACAACATAAAAGGGTGGAATGCAATTATCCGGGAACGTCGATCAACTTCATCGTGGACTCAGGGTCGAACTCAAACTATTTCGCAGCTCTGATAGAATATGAAGATGGAGATGGGGAGCTTGGTTCAGTGGAGCTGAAACAGGCGGTGGACTCGTACTCATGGATTCCAATGAAGCAGTCATGGGGTGCAGTTTGGAAACTGGACTATGGCTCAGCCCTTCAAGCTCCCTTCTCCCTCAGACTCACCGCCCTCGACTCCGGTAAGACCGTGGTCGCTAACAACGTGATTCCCGCCGGGTGGCAGCCTGGGCAGAGTTATAGATCAGTGGTCAACTTCGATACTTAATTAATTAATAAATATAAGTTGAGAGTTTAATTATGAGATTAGTAGAATGAAATTAAAGAAAGTTGGGGGAGCTGTGTTGTTTGTAATAACAGAGCAGTAAATCAGTTATAGTAATATTAACTACTAGGTATGAGTATGAGA 993 46.83 MGHFLFFVAILSVSVTPSFCFHPKSFNVSKYQSYDLDWSSAVATWYGPADGAGSDGGSCGYGKAVEQPPFSSLIAAGGPSLYKSGKACGACYQVKCSGEGACSGNPVTVVITDSCPGGSCASDSVHFDLSGTAFGAMAATGRADELRSLGVLHIQHKRVECNYPGTSINFIVDSGSNSNYFAALIEYEDGDGELGSVELKQAVDSYSWIPMKQSWGAVWKLDYGSALQAPFSLRLTALDSGKTVVANNVIPAGWQPGQSYRSVVNFDT 268
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10515389 10516563 + XM_039020812.1 Bhi01g00582 23355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi01g00582 268 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 179 262 IPR007117 -
Bhi01g00582 268 PANTHER EXPANSIN-B2-RELATED 7 267 - -
Bhi01g00582 268 SUPERFAMILY Barwin-like endoglucanases 37 186 IPR036908 -
Bhi01g00582 268 Gene3D - 163 266 IPR036749 -
Bhi01g00582 268 Gene3D - 24 162 IPR036908 -
Bhi01g00582 268 Pfam Expansin C-terminal domain 168 251 IPR007117 -
Bhi01g00582 268 PRINTS Expansin/Lol pI family signature 37 52 IPR007118 GO:0005576
Bhi01g00582 268 PRINTS Expansin/Lol pI family signature 55 73 IPR007118 GO:0005576
Bhi01g00582 268 PRINTS Expansin/Lol pI family signature 78 96 IPR007118 GO:0005576
Bhi01g00582 268 PRINTS Expansin/Lol pI family signature 149 165 IPR007118 GO:0005576
Bhi01g00582 268 PRINTS Expansin/Lol pI family signature 208 222 IPR007118 GO:0005576
Bhi01g00582 268 PRINTS Expansin/Lol pI family signature 248 262 IPR007118 GO:0005576
Bhi01g00582 268 SUPERFAMILY PHL pollen allergen 167 262 IPR036749 -
Bhi01g00582 268 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 56 166 IPR007112 -
Bhi01g00582 268 PANTHER EXPANSIN-B3 7 267 - -
Bhi01g00582 268 SMART dpbb_1 74 156 IPR007112 -
Bhi01g00582 268 PRINTS Major pollen allergen Lol pI signature 76 87 IPR005795 GO:0005576|GO:0019953
Bhi01g00582 268 PRINTS Major pollen allergen Lol pI signature 116 131 IPR005795 GO:0005576|GO:0019953
Bhi01g00582 268 PRINTS Major pollen allergen Lol pI signature 138 153 IPR005795 GO:0005576|GO:0019953
Bhi01g00582 268 PRINTS Major pollen allergen Lol pI signature 170 185 IPR005795 GO:0005576|GO:0019953
Bhi01g00582 268 PRINTS Major pollen allergen Lol pI signature 186 201 IPR005795 GO:0005576|GO:0019953
Bhi01g00582 268 PRINTS Major pollen allergen Lol pI signature 217 234 IPR005795 GO:0005576|GO:0019953
Bhi01g00582 268 Pfam Lytic transglycolase 75 151 IPR009009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00582 Bhi-Chr1:10515389 Bhi10g01147 Bhi-Chr10:24063003 8.09E-76 dispersed
Bhi01g00582 Bhi-Chr1:10515389 Bhi05g01854 Bhi-Chr5:58157608 2.01E-76 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi01g00582 - - csv:101219528 487.648